RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TWIST1Q15672 202 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 LDLRAD2Q5SZI1 272 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 CRIP1P50238 77 aa11.37□□□□□ -0.59
CPSF7-201ENST00000340437 ORM1P02763 201 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 APOBEC3AP31941 199 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-201ENST00000340437 CSN1S1P47710 185 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-201ENST00000340437 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 PRSS57Q6UWY2 283 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 K7EIM0 57 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 NMUP48645 174 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
CPSF7-201ENST00000340437 CACNG7P62955 275 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-201ENST00000340437 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 OR10AG1Q8NH19 301 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 PSG3Q16557 428 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 SHANK2-AS3Q9BTD1 123 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-201ENST00000340437 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
CPSF7-201ENST00000340437 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 J3KRW8 73 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 HAX1O00165 279 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 GPR183P32249 361 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 TAX1BP3O14907 124 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 CT83Q5H943 113 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 FAM71F2Q6NXP2 309 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 SIGLEC15Q6ZMC9 328 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 CKS2P33552 79 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
CPSF7-201ENST00000340437 TNFRSF13BO14836 293 aaPredicted RBP11.33□□□□□ -0.59
CPSF7-201ENST00000340437 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.59
CPSF7-201ENST00000340437 THYN1Q9P016 225 aa11.33□□□□□ -0.59
CPSF7-201ENST00000340437 CRYGBP07316 175 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 EVI2AP22794 236 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-201ENST00000340437 C12orf54Q6X4T0 127 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 NBR2O15453 112 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 ZNF207O43670 478 aaKnown RBP11.33□□□□□ -0.6
CPSF7-201ENST00000340437 SH2D1AO60880 128 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 ZNF414Q96IQ9 312 aa11.33□□□□□ -0.6
CPSF7-201ENST00000340437 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 SCRT2Q9NQ03 307 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 MTORP42345 2549 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 B9A039 149 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 Q8NA96 180 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 KAAG1Q9UBP8 84 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 PSG9Q00887 426 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 SMIM12Q96EX1 92 aa11.32□□□□□ -0.6
CPSF7-201ENST00000340437 ERCC8Q13216 396 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 VGLL1Q99990 258 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 H3BRN7 92 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 UBTD1Q9HAC8 227 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 C7orf71A4D174 169 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 PLP1P60201 277 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
CPSF7-201ENST00000340437 MFAP4P55083 255 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 RHOGP84095 191 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 PKD1L2Q7Z442 2459 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 RBX1P62877 108 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 LINC00527Q9UJ94 153 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 TCF15Q12870 199 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 TMEM14CQ9P0S9 112 aa11.3□□□□□ -0.6
CPSF7-201ENST00000340437 GAS8-AS1O95177 125 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 C21orf62Q9NYP8 219 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 NDUFS7O75251 213 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 NPYP01303 97 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 H3BUT2 72 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 PRSS1P07477 247 aa11.29□□□□□ -0.6
CPSF7-201ENST00000340437 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 RPL11P62913 178 aaKnown RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-201ENST00000340437 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-201ENST00000340437 NDPQ00604 133 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
CPSF7-201ENST00000340437 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms