RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 MT-ND6P03923 174 aa12.52□□□□□ -0.41
SCNN1A-202ENST00000338748 CHEK1O14757 476 aa12.51□□□□□ -0.41
SCNN1A-202ENST00000338748 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
SCNN1A-202ENST00000338748 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-202ENST00000338748 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
SCNN1A-202ENST00000338748 SERF1AO75920 110 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 CAMPP49913 170 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 PSG9Q00887 426 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 DEFB113Q30KQ7 82 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 CT83Q5H943 113 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 C16orf54Q6UWD8 224 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 Q8TAT8 98 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 HELZ2Q9BYK8 2649 aaKnown RBP12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 CUBNO60494 3623 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 A0A1B0GXF2 115 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 K7EQM0 130 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 Q5PR19 223 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 OR2D3Q8NGH3 330 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 VGLL1Q99990 258 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 ZFP30Q9Y2G7 519 aa12.5□□□□□ -0.41
SCNN1A-202ENST00000338748 A8MWL6 223 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 SRIP30626 198 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 LOXL1Q08397 574 aaPredicted RBP12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 M0QZK8 103 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 CSN1S1P47710 185 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 RELQ04864 619 aaPredicted RBP12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 PRDM13Q9H4Q3 707 aa12.49□□□□□ -0.41
SCNN1A-202ENST00000338748 APCSP02743 223 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 PF4V1P10720 104 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 ARL3P36405 182 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 TMEM190Q8WZ59 177 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 RCHY1Q96PM5 261 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 METTL26Q96S19 204 aa12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 PRRC2AP48634 2157 aaKnown RBP12.48□□□□□ -0.41
SCNN1A-202ENST00000338748 A0A087X0K7 114 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 ZNF253O75346 499 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 CFHR3Q02985 330 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 COX19Q49B96 90 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 KRTAP1-3Q8IUG1 177 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 U3KQE9 123 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 Q0VG73 95 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 LCN12Q6JVE5 192 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 RASL11AQ6T310 242 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 C10orf99Q6UWK7 81 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 BAGE3Q86Y29 109 aa12.47□□□□□ -0.41
SCNN1A-202ENST00000338748 SONP18583 2426 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 J3QLI3 93 aa12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 IGLV1-40P01703 118 aa12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 RBPMS2Q6ZRY4 209 aaKnown RBP12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
SCNN1A-202ENST00000338748 TRAV8-2A0A0B4J237 113 aa12.46□□□□□ -0.42
SCNN1A-202ENST00000338748 FSHBP01225 129 aa12.46□□□□□ -0.42
SCNN1A-202ENST00000338748 CD33P20138 364 aa12.46□□□□□ -0.42
SCNN1A-202ENST00000338748 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.42
SCNN1A-202ENST00000338748 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.42
SCNN1A-202ENST00000338748 SMAD7O15105 426 aaKnown RBP12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 RAB9AP51151 201 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 ZNF80P51504 273 aaPredicted RBP12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 ERCC8Q13216 396 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 DNLZQ5SXM8 178 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 OR4B1Q8NGF8 309 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 Q96MF0 132 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 PRR25Q96S07 402 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 ATP6V0BQ99437 205 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 SERTM2A0A1B0GWG4 89 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 BRI3O95415 125 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 ESDP10768 282 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 HBBP68871 147 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 MYO9AB2RTY4 2548 aa12.45□□□□□ -0.42
SCNN1A-202ENST00000338748 H3BUA1 57 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 S100A7P31151 101 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 FAM209BQ5JX69 171 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 C8orf86Q6ZUL3 223 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 PRO1933Q9H354 126 aa12.44□□□□□ -0.42
SCNN1A-202ENST00000338748 SH2D1AO60880 128 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 TMSB15BA0A087X1C1 80 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 CT45A10P0DMU9 189 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms