RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 PRNTQ86SH4 94 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 DAZAP1Q96EP5 407 aaKnown RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 ATP6V0BQ99437 205 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 GNB1LQ9BYB4 327 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 HELZ2Q9BYK8 2649 aaKnown RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 BEX4Q9NWD9 120 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 LINC00527Q9UJ94 153 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 MYO9AB2RTY4 2548 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 C19orf71A6NCJ1 209 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 H3BUA1 57 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 TGFAP01135 160 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 MT-ND6P03923 174 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 TRGV3P03979 118 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 FABP4P15090 132 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 CSN1S1P47710 185 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 RAB9AP51151 201 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 KRTAP10-9P60411 292 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 RELQ04864 619 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 LOXL1Q08397 574 aaPredicted RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 OR10D4PQ8NGN7 298 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 RPP21Q9H633 154 aaKnown RBP6.74□□□□□ -1.33
LSAMP-201ENST00000333617 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 ZFP30Q9Y2G7 519 aa6.74□□□□□ -1.33
LSAMP-201ENST00000333617 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 FLNAP21333 2647 aaKnown RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 M0R3E3 92 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 ZNF253O75346 499 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 BRI3O95415 125 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 P01737 135 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 FRMD6-AS1P0C7T7 363 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 TPPP2P59282 170 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 PSG3Q16557 428 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 CT83Q5H943 113 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 MRPL54Q6P161 138 aaKnown RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 LINC00322Q6ZN03 302 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 TMEM136Q6ZRR5 245 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 CIARTQ8N365 385 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 PRSS22Q9GZN4 317 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-201ENST00000333617 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 SMAD5-AS1Q9Y6J3 95 aa6.73□□□□□ -1.33
LSAMP-201ENST00000333617 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 A8MWL6 223 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 BUB3O43684 328 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
LSAMP-201ENST00000333617 RAB4BP61018 213 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 DEFB113Q30KQ7 82 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 LRRC75A-AS1Q8N1F1 130 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 GBGT1Q8N5D6 347 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 MAPK1IP1LQ8NDC0 245 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 WIPF2Q8TF74 440 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-201ENST00000333617 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-201ENST00000333617 NOL4LQ96MY1 436 aaPredicted RBP6.72□□□□□ -1.33
LSAMP-201ENST00000333617 METTL26Q96S19 204 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 NEU1Q99519 415 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 NIT2Q9NQR4 276 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 CCDC168Q8NDH2 2452 aa6.72□□□□□ -1.33
LSAMP-201ENST00000333617 A0A087X0K7 114 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 ZNF785A8K8V0 405 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 HLA-DQA1P01909 254 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 AMBPP02760 352 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 CRISP2P16562 243 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 ARL3P36405 182 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 BLCAPP62952 87 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 DEFB112Q30KQ8 113 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 Q5PR19 223 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 C1orf194Q5T5A4 169 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 OR4B1Q8NGF8 309 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 TMEM18Q96B42 140 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 ZC2HC1AQ96GY0 325 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 USMG5Q96IX5 58 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 GFRA4Q9GZZ7 299 aa6.71□□□□□ -1.34
LSAMP-201ENST00000333617 GRIFINA4D1Z8 144 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 FBLL1A6NHQ2 334 aaKnown RBP6.7□□□□□ -1.34
LSAMP-201ENST00000333617 CHEK1O14757 476 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 IGHV4-31P0DP07 118 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 PF4V1P10720 104 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 ATP5L2Q7Z4Y8 100 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 AP5S1Q9NUS5 200 aa6.7□□□□□ -1.34
LSAMP-201ENST00000333617 GCN1Q92616 2671 aaKnown RBP6.7□□□□□ -1.34
LSAMP-201ENST00000333617 IGHV3-66A0A0C4DH42 116 aa6.69□□□□□ -1.34
LSAMP-201ENST00000333617 A0A0G2JLM5 398 aa6.69□□□□□ -1.34
LSAMP-201ENST00000333617 FAM231BA6NCW3 169 aa6.69□□□□□ -1.34
LSAMP-201ENST00000333617 ZNF207O43670 478 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms