RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 ATP1A1-AS1Q5TC04 95 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 H3BRN7 92 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 PRRG2O14669 202 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
CCDC60-201ENST00000327554 GAS8-AS1O95177 125 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
CCDC60-201ENST00000327554 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 LINC00311Q8N616 119 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 MAP1LC3AQ9H492 121 aa10.04□□□□□ -0.8
CCDC60-201ENST00000327554 IGHV3-72A0A0B4J1Y9 119 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 DPM2O94777 84 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 PRSS1P07477 247 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 CNTFRP26992 372 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 TWIST1Q15672 202 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 TAL2Q16559 108 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 FOXC2Q99958 501 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
CCDC60-201ENST00000327554 PLCE1Q9P212 2302 aa10.03□□□□□ -0.8
CCDC60-201ENST00000327554 TEX22C9J3V5 150 aa10.02□□□□□ -0.8
CCDC60-201ENST00000327554 I3L2K1 104 aa10.02□□□□□ -0.8
CCDC60-201ENST00000327554 ENSAO43768 121 aaKnown RBP10.02□□□□□ -0.8
CCDC60-201ENST00000327554 RBP4P02753 201 aa10.02□□□□□ -0.8
CCDC60-201ENST00000327554 CRYGBP07316 175 aa10.02□□□□□ -0.8
CCDC60-201ENST00000327554 RASL11BQ9BPW5 248 aa10.02□□□□□ -0.8
CCDC60-201ENST00000327554 SPENQ96T58 3664 aaKnown RBP10.02□□□□□ -0.8
CCDC60-201ENST00000327554 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 EGR2P11161 476 aaPredicted RBP10.02□□□□□ -0.81
CCDC60-201ENST00000327554 MC5RP33032 325 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 PROCRQ9UNN8 238 aa10.02□□□□□ -0.81
CCDC60-201ENST00000327554 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
CCDC60-201ENST00000327554 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
CCDC60-201ENST00000327554 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
CCDC60-201ENST00000327554 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
CCDC60-201ENST00000327554 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
CCDC60-201ENST00000327554 A0A1B0GWB2 263 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 CEACAM4O75871 244 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 ATP5LO75964 103 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 WT1P19544 449 aaPredicted RBP10□□□□□ -0.81
CCDC60-201ENST00000327554 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 TMEM158Q8WZ71 300 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 SIGLEC9Q9Y336 463 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 TRBV7-3A0A075B6L6 115 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 TNFRSF6BO95407 300 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 SRSF6Q13247 344 aaKnown RBP10□□□□□ -0.81
CCDC60-201ENST00000327554 LINC01559Q495D7 138 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
CCDC60-201ENST00000327554 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
CCDC60-201ENST00000327554 MALRD1Q5VYJ5 2156 aa10□□□□□ -0.81
CCDC60-201ENST00000327554 APOMO95445 188 aa9.99□□□□□ -0.81
CCDC60-201ENST00000327554 PPIFP30405 207 aaKnown RBP9.99□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF80P51504 273 aaPredicted RBP9.99□□□□□ -0.81
CCDC60-201ENST00000327554 FOXI1Q12951 378 aa9.99□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF491Q8N8L2 437 aa9.99□□□□□ -0.81
CCDC60-201ENST00000327554 ZNF418Q8TF45 676 aaPredicted RBP9.99□□□□□ -0.81
CCDC60-201ENST00000327554 TMEM160Q9NX00 188 aa9.99□□□□□ -0.81
CCDC60-201ENST00000327554 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
CCDC60-201ENST00000327554 ZFHX4Q86UP3 3567 aa9.99□□□□□ -0.81
CCDC60-201ENST00000327554 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
CCDC60-201ENST00000327554 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
CCDC60-201ENST00000327554 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
CCDC60-201ENST00000327554 SYT8Q8NBV8 401 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 PRR25Q96S07 402 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
CCDC60-201ENST00000327554 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
CCDC60-201ENST00000327554 DLX6P56179 175 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 ATP6V0E2Q8NHE4 81 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
CCDC60-201ENST00000327554 K7EIM0 57 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 CCL8P80075 99 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 KLRD1Q13241 179 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 FHL3Q13643 280 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 PDE6HQ13956 83 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 SEM1Q6ZVN7 128 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 CNFNQ9BYD5 112 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 IL4P05112 153 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 SPINK8P0C7L1 97 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 PLGLAQ15195 96 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 CYSLTR1Q9Y271 337 aa9.97□□□□□ -0.81
CCDC60-201ENST00000327554 SMG1Q96Q15 3661 aaKnown RBP9.96□□□□□ -0.81
CCDC60-201ENST00000327554 LINC01619G3V211 115 aa9.96□□□□□ -0.81
CCDC60-201ENST00000327554 TSPAN13O95857 204 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms