RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 RAI1Q7Z5J4 1906 aaPredicted RBP10.34□□□□□ -0.75
LIN28A-202ENST00000326279 HOXA5P20719 270 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 COX19Q49B96 90 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 Q8N9W7 124 aa10.34□□□□□ -0.75
LIN28A-202ENST00000326279 FNDC10F2Z333 226 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 SERF1AO75920 110 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 HBBP68871 147 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 IGKV1-17P01599 117 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 ID1P41134 155 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 SAPCD1Q5SSQ6 148 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 RPLP1P05386 114 aaKnown RBP10.33□□□□□ -0.76
LIN28A-202ENST00000326279 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
LIN28A-202ENST00000326279 PRSS1P07477 247 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 RAB9AP51151 201 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 ERCC8Q13216 396 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 KLHDC1Q8N7A1 406 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 C8orf31Q8N9H6 132 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 DIRC3C9JPN6 131 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
LIN28A-202ENST00000326279 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
LIN28A-202ENST00000326279 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 A0A087X0M5 115 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 A0A1B0GX30 115 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 K7EIM0 57 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 TOMM40O96008 361 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 Q6ZS46 218 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 SHANK2-AS3Q9BTD1 123 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 TMEM242Q9NWH2 141 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
LIN28A-202ENST00000326279 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 C9JCJ5 164 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 LINC00574Q9H8X3 128 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 C5orf52A6NGY3 159 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 PHLDA3Q9Y5J5 127 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 FXYD5Q96DB9 178 aa10.31□□□□□ -0.76
LIN28A-202ENST00000326279 SAP30O75446 220 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 FXYD7P58549 80 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 IZUMO1RA6ND01 250 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
LIN28A-202ENST00000326279 EMP1P54849 157 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 LCN12Q6JVE5 192 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 TMEM136Q6ZRR5 245 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 VPREB3Q9UKI3 123 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 FCER1GP30273 86 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 SIGLEC15Q6ZMC9 328 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 AP1S3Q96PC3 154 aa10.3□□□□□ -0.76
LIN28A-202ENST00000326279 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
LIN28A-202ENST00000326279 FOXL1Q12952 345 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 I3L2K1 104 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 K7EN84 100 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 BTF3P20290 206 aaKnown RBP10.29□□□□□ -0.76
LIN28A-202ENST00000326279 ZNF138P52744 262 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 HIST1H2BLQ99880 126 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
LIN28A-202ENST00000326279 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 J3QLI3 93 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 TSKUQ8WUA8 353 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 TRBV19A0A075B6N1 114 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 SNRPD3P62318 126 aaKnown RBP10.28□□□□□ -0.76
LIN28A-202ENST00000326279 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 C18orf15Q96N68 181 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 PEF1Q9UBV8 284 aaKnown RBP10.28□□□□□ -0.76
LIN28A-202ENST00000326279 DCHS2Q6V1P9 2916 aa10.28□□□□□ -0.76
LIN28A-202ENST00000326279 CELSR2Q9HCU4 2923 aa10.27□□□□□ -0.76
LIN28A-202ENST00000326279 LEPROTL1O95214 131 aa10.27□□□□□ -0.76
LIN28A-202ENST00000326279 TRBV12-3P01733 135 aa10.27□□□□□ -0.76
LIN28A-202ENST00000326279 TMEM183BQ1AE95 376 aa10.27□□□□□ -0.76
LIN28A-202ENST00000326279 C3orf56Q8N813 242 aa10.27□□□□□ -0.76
LIN28A-202ENST00000326279 COL27A1Q8IZC6 1860 aaPredicted RBP10.27□□□□□ -0.76
LIN28A-202ENST00000326279 DSCAML1Q8TD84 2053 aa10.27□□□□□ -0.77
LIN28A-202ENST00000326279 LOXL1Q08397 574 aaPredicted RBP10.27□□□□□ -0.77
LIN28A-202ENST00000326279 C8orf49Q96NF6 230 aa10.27□□□□□ -0.77
LIN28A-202ENST00000326279 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
LIN28A-202ENST00000326279 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
LIN28A-202ENST00000326279 HIST3H2BBQ8N257 126 aa10.27□□□□□ -0.77
LIN28A-202ENST00000326279 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms