RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 COLQQ9Y215 455 aaPredicted RBP8.02□□□□□ -1.13
COL12A1-201ENST00000322507 A6NED7 52 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 IGKV1D-33P01593 117 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 IGKV1-33P01594 117 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 RTBDNQ9BSG5 229 aaPredicted RBP8.02□□□□□ -1.13
COL12A1-201ENST00000322507 TNRC6BQ9UPQ9 1833 aaKnown RBP8.02□□□□□ -1.13
COL12A1-201ENST00000322507 LOC102723996A0A087X1L8 192 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 CECR9P0C854 216 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 CXCL1P09341 107 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 PRR30Q53SZ7 412 aaPredicted RBP8.02□□□□□ -1.13
COL12A1-201ENST00000322507 ZNF106Q9H2Y7 1883 aaKnown RBP8.02□□□□□ -1.13
COL12A1-201ENST00000322507 CGAP01215 116 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 C22orf46C9J442 243 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 NDUFB1O75438 58 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
COL12A1-201ENST00000322507 TMEM133Q9H2Q1 129 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 A0A0G2JK05 382 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 CFHR1Q03591 330 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 MINOS1Q5TGZ0 78 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 MESP1Q9BRJ9 268 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 MINOS1-NBL1R4GNA1 71 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 KIAA1549LQ6ZVL6 1849 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 ZNF525Q8N782 197 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 ERCC8Q13216 396 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 FOXI2Q6ZQN5 318 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 IGHV3-72A0A0B4J1Y9 119 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 PROB1E7EW31 1015 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 TIAF1O95411 115 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 PRSS22Q9GZN4 317 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 TRGV2A0A075B6R0 118 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 LY6G5BQ8NDX9 201 aa8.01□□□□□ -1.13
COL12A1-201ENST00000322507 TRBV7-1A0A0A6YYK4 115 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 MORN5Q5VZ52 161 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 IGHV3OR16-12A0A075B7B8 117 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 NDUFS5O43920 106 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 RPL39P5Q59GN2 51 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 IMUPQ9GZP8 106 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 ZNF138P52744 262 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 HERVK_113P63121 156 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 CRYGBP07316 175 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 DEFB125Q8N687 156 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 IMMP1LQ96LU5 166 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 LINC01587Q99440 93 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 TFF2Q03403 129 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 TRGV9Q99603 122 aa8□□□□□ -1.13
COL12A1-201ENST00000322507 KIR2DL5BA0A0G2JN68 375 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 KIR2DL5BA0A0G2JPC4 375 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 RNF222A6NCQ9 220 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 KIR2DL5AQ8N109 375 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 USMG5Q96IX5 58 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 TRAV12-2A0A075B6T6 113 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 RNASE4P34096 147 aaKnown RBP7.99□□□□□ -1.13
COL12A1-201ENST00000322507 SAA2-SAA4A0A096LPE2 208 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 TRAV14DV4A0A0A6YYC5 116 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 SAA2P0DJI9 122 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-201ENST00000322507 CFPP27918 469 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 GAS1P54826 345 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 C20orf204Q6ZNR8 217 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 DMRTC2Q8IXT2 367 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-201ENST00000322507 LINC01620Q4KN68 170 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
COL12A1-201ENST00000322507 MYO9AB2RTY4 2548 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 NOTCH4Q99466 2003 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 C18orf32Q8TCD1 76 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 IL15RAQ13261 267 aa7.99□□□□□ -1.13
COL12A1-201ENST00000322507 A0A1W2PR77 199 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 LCN12Q6JVE5 192 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 ALPK3Q96L96 1907 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 TRBV6-6A0A0A6YYG2 114 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 STHQ8IWL8 128 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 Q6ZS49 121 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 MUC6Q6W4X9 2439 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 CELA2AP08217 269 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 ADAMTS9Q9P2N4 1935 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 PRIMA1Q86XR5 153 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 RNF183Q96D59 192 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 REG4Q9BYZ8 158 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 FAM110AQ9BQ89 295 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 MSGN1A6NI15 193 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 RHODO00212 210 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 CD7P09564 240 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 ID3Q02535 119 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 FOXI1Q12951 378 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 SIGLEC15Q6ZMC9 328 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 E9PLN8 166 aa7.98□□□□□ -1.13
COL12A1-201ENST00000322507 EFNB3Q15768 340 aa7.97□□□□□ -1.13
COL12A1-201ENST00000322507 LGALS9BQ3B8N2 356 aa7.97□□□□□ -1.13
COL12A1-201ENST00000322507 LGALS9CQ6DKI2 356 aa7.97□□□□□ -1.13
COL12A1-201ENST00000322507 PYGO2Q9BRQ0 406 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms