RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FGFBP3Q8TAT2 258 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 ATP5G2Q06055 141 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 LMO1P25800 156 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 CENPVQ7Z7K6 275 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-201ENST00000322213 Q6ZUT4 128 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 PRSS46E5RG02 174 aa5.77□□□□□ -1.49
SMC1A-201ENST00000322213 RSPO4Q2I0M5 234 aaPredicted RBP5.77□□□□□ -1.49
SMC1A-201ENST00000322213 CCL8P80075 99 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 GFRALQ6UXV0 394 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 PTH2Q96A98 100 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 IGHV3-72A0A0B4J1Y9 119 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 LINC01565O15544 149 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 ZNF415Q09FC8 603 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 C20orf204Q6ZNR8 217 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 ZNF837Q96EG3 531 aaPredicted RBP5.76□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV3-7A0A075B6H7 116 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 LOC102723996A0A087X1L8 192 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 Q6ZRM9 215 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 TEN1Q86WV5 123 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 SPACA3Q8IXA5 215 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 LEPROTO15243 131 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 CD3EP07766 207 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 C21orf62Q9NYP8 219 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 SH2D1AO60880 128 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 AMN1Q8IY45 258 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 ABHD17AQ96GS6 310 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 MCRIP2Q9BUT9 160 aaKnown RBP5.76□□□□□ -1.49
SMC1A-201ENST00000322213 PRR7Q8TB68 274 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 CHD8Q9HCK8 2581 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 TRAV40A0A0B4J280 105 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 VWC2Q2TAL6 325 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 GAGE2AQ6NT46 116 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 PRO1854Q9UHT4 67 aa5.76□□□□□ -1.49
SMC1A-201ENST00000322213 LINC00473A8K010 186 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 PCOLCEQ15113 449 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 DEFB109BQ30KR1 87 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 USP24Q9UPU5 2620 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 A0A0G2JRQ6 117 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 PMS2P5A8MQ11 134 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 C1orf43Q9BWL3 253 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-201ENST00000322213 SLC25A20O43772 301 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
SMC1A-201ENST00000322213 PRSS29PA6NIE9 313 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 NDUFB8O95169 186 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 C1orf147Q96MC9 270 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-201ENST00000322213 FAM104BQ5XKR9 115 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 FAM110AQ9BQ89 295 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 ARMS2P0C7Q2 107 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 CD28P10747 220 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 K7EMI3 77 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 ACYP1P07311 99 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 CELA3BP08861 270 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 FXYD7P58549 80 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 Q6P435 159 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 HIGD1BQ9P298 99 aa5.75□□□□□ -1.49
SMC1A-201ENST00000322213 TRAV21A0A0B4J279 112 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 SHISA9B4DS77 424 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV1D-33P01593 117 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV1-33P01594 117 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 CLPSP04118 112 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 UTF1Q5T230 341 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 RPP25Q9BUL9 199 aaKnown RBP5.74□□□□□ -1.49
SMC1A-201ENST00000322213 C12orf74Q32Q52 190 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 MRPL14Q6P1L8 145 aaKnown RBP5.74□□□□□ -1.49
SMC1A-201ENST00000322213 F8VRH5 84 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 DYNLRB2Q8TF09 96 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 RNF183Q96D59 192 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 TMEM133Q9H2Q1 129 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 PSG7Q13046 419 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 ZNF576Q9H609 170 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV2-40A0A087WW87 121 aaPredicted RBP5.74□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV2D-40P01614 121 aaPredicted RBP5.74□□□□□ -1.49
SMC1A-201ENST00000322213 ZIC4Q8N9L1 334 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 LINC00479Q96M42 142 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 TIMM21Q9BVV7 248 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 C16orf97H3BN30 126 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 GLRXP35754 106 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 LTAP01374 205 aa5.74□□□□□ -1.49
SMC1A-201ENST00000322213 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-201ENST00000322213 CRPP02741 224 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 FGF6P10767 208 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 TRAV8-3A0A0A6YYJ7 113 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 FAM106AQ4KMX7 169 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 ZCCHC24Q8N2G6 241 aaKnown RBP5.73□□□□□ -1.49
SMC1A-201ENST00000322213 ANKRD29Q8N6D5 301 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 DNAJC30Q96LL9 226 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 DPH3P1Q9H4G8 78 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 HLA-DRB4P13762 266 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 SLC25A16P16260 332 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 CTRLP40313 264 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 TCF15Q12870 199 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 MRPL51Q4U2R6 128 aaKnown RBP5.73□□□□□ -1.49
SMC1A-201ENST00000322213 RNF144BQ7Z419 303 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 FAM57AQ8TBR7 257 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 HLA-DRB4X5D2U9 266 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms