RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 C15orf32Q32M92 178 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 FGFBP3Q8TAT2 258 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 ZNHIT1O43257 154 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 B5MCH6 92 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 WNT5AP41221 380 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 NPBQ8NG41 125 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 ZNF524Q96C55 264 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 RNF183Q96D59 192 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 DUX3Q96PT4 197 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
USH2A-201ENST00000307340 TRAV8-2A0A0B4J237 113 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 A6NNC1 897 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 ANKRD29Q8N6D5 301 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TIMM17AQ99595 171 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 FBXL7Q9UJT9 491 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 K7EMT4 169 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 IGHV1-69P01742 117 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 CD7P09564 240 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 IL17BQ9UHF5 180 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TMEM256-PLSCR3K7ERE1 68 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 MGPP08493 103 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 VMO1Q7Z5L0 202 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 PRO1854Q9UHT4 67 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 FAM157AC9JC47 383 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 H3BT86 120 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 Q8N8P6 123 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 SDHAF1A6NFY7 115 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 MSGN1A6NI15 193 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 FOXI2Q6ZQN5 318 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 LCNL1Q6ZST4 164 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TRGV2A0A075B6R0 118 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 ERCC8Q13216 396 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 COX17Q14061 63 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 DNAH12Q6ZR08 3092 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 C9orf118A6NHY6 69 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 Q6ZWC4 215 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 ZNRF1Q8ND25 227 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 LSM4Q9Y4Z0 139 aaKnown RBP3.26□□□□□ -1.89
USH2A-201ENST00000307340 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 HCSTQ9UBK5 93 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 IGHV1-58A0A0C4DH39 117 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TIMM21Q9BVV7 248 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 THBDP07204 575 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 KLHDC3Q9BQ90 382 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 SCO2A0A1W2PP80 73 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 PTGER1P34995 402 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 ZNF319Q9P2F9 582 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TRAV41A0A0B4J266 112 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 BEX4Q9NWD9 120 aaPredicted RBP3.26□□□□□ -1.89
USH2A-201ENST00000307340 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 TRAV8-6A0A0B4J262 113 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 F8WEM9 126 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 LINC01619G3V211 115 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 LYRM9A8MSI8 78 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 ADARB2-AS1A8MUL3 147 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 BRI3O95415 125 aa3.26□□□□□ -1.89
USH2A-201ENST00000307340 CD300EQ496F6 205 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 TRAV4A0A0B4J268 109 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 CSN3P07498 182 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 CD59P13987 128 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 COX7A1P24310 79 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 COL8A2P25067 703 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 FOXG1P55316 489 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 EIF4EBP1Q13541 118 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 MRAPQ8TCY5 172 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 SSBP2P81877 361 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 EVI2AP22794 236 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 OCC1Q8TAD7 63 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 TRBV19A0A075B6N1 114 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 SMAD7O15105 426 aaKnown RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 RSPO3Q9BXY4 272 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 A0A087X0K7 114 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 A0A1B0GX51 115 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 Q6P435 159 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 ATOX1O00244 68 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 DMRTC1Q5HYR2 192 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 C9orf50Q5SZB4 431 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 KIR2DL5BQ8NHK3 375 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 METRNQ9UJH8 293 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 EGR1P18146 543 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 UBE2BP63146 152 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 ZNF672Q499Z4 452 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 PRR25Q96S07 402 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 TIMM17BO60830 172 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 MYF5P13349 255 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 MRPS36P82909 103 aaKnown RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 GATD1Q8NB37 220 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 SVIPQ8NHG7 77 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 SPAG8Q99932 426 aaPredicted RBP3.25□□□□□ -1.89
USH2A-201ENST00000307340 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 IGHV2-70DA0A0C4DH43 119 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 SMIM9A6NGZ8 99 aa3.25□□□□□ -1.89
USH2A-201ENST00000307340 TRAV5A0A0B4J249 113 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 LOC389332A0A1B0GUA5 103 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 M0QXV9 152 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms