RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 GNB1LQ9BYB4 327 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 KLK15Q9H2R5 256 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
SMG8-201ENST00000300917 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 PF4V1P10720 104 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 NTF3P20783 257 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 M0QZ24 198 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 NDUFS8O00217 210 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 RPL7P18124 248 aaKnown RBP11.29□□□□□ -0.6
SMG8-201ENST00000300917 ATP5G2Q06055 141 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 ERCC8Q13216 396 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 VGLL1Q99990 258 aa11.29□□□□□ -0.6
SMG8-201ENST00000300917 APCP25054 2843 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 B4DSR2 109 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 PAX1P15863 534 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 CSN1S1P47710 185 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 ACANP16112 2415 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 K7EQM0 130 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 PSG3Q16557 428 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 NBPF19A0A087WUL8 3843 aa11.28□□□□□ -0.6
SMG8-201ENST00000300917 A8MWL6 223 aa11.27□□□□□ -0.6
SMG8-201ENST00000300917 PRAC2D3DTV9 90 aa11.27□□□□□ -0.6
SMG8-201ENST00000300917 SCGB2A1O75556 95 aa11.27□□□□□ -0.6
SMG8-201ENST00000300917 GOSR1O95249 250 aa11.27□□□□□ -0.6
SMG8-201ENST00000300917 CUBNO60494 3623 aa11.27□□□□□ -0.6
SMG8-201ENST00000300917 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
SMG8-201ENST00000300917 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
SMG8-201ENST00000300917 CRIP1P50238 77 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
SMG8-201ENST00000300917 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 CHEK1O14757 476 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
SMG8-201ENST00000300917 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
SMG8-201ENST00000300917 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
SMG8-201ENST00000300917 J3KRW8 73 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 RNF114Q9Y508 228 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 TENM4Q6N022 2769 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 AMTP48728 403 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 DEFB1P60022 68 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
SMG8-201ENST00000300917 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 UNQ9165/PRO28630Q6UXU0 137 aa11.26□□□□□ -0.61
SMG8-201ENST00000300917 KRTDAPP60985 99 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 Q6ZWC4 215 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
SMG8-201ENST00000300917 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 BUB3O43684 328 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 MT-ND6P03923 174 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
SMG8-201ENST00000300917 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 S100A7P31151 101 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 ARL3P36405 182 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 HELZ2Q9BYK8 2649 aaKnown RBP11.24□□□□□ -0.61
SMG8-201ENST00000300917 PMCHL1Q16048 86 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
SMG8-201ENST00000300917 HBBP68871 147 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 LCN12Q6JVE5 192 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
SMG8-201ENST00000300917 SORL1Q92673 2214 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 IGHG4P01861 327 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 CSN3P07498 182 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 SRD5A1P18405 259 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 ZNF138P52744 262 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 METTL26Q96S19 204 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 TXN2Q99757 166 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 MTORP42345 2549 aa11.23□□□□□ -0.61
SMG8-201ENST00000300917 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
SMG8-201ENST00000300917 RBPMS2Q6ZRY4 209 aaKnown RBP11.23□□□□□ -0.61
SMG8-201ENST00000300917 ZNF469Q96JG9 3925 aaPredicted RBP11.23□□□□□ -0.61
SMG8-201ENST00000300917 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
SMG8-201ENST00000300917 PSG9Q00887 426 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 ZNF664Q8N3J9 261 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 A6NDX4 124 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 EDN2P20800 178 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 A0A1W2PS18 150 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 SH2D1AO60880 128 aa11.22□□□□□ -0.61
SMG8-201ENST00000300917 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms