RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 C10orf105Q8TEF2 133 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 LAMTOR2Q9Y2Q5 125 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 FBXL19-AS1Q494R0 122 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 MRPL27Q9P0M9 148 aaKnown RBP14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 IGHV4-59P01825 116 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 EVI2AP22794 236 aa14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 ANKHD1Q8IWZ3 2542 aaKnown RBP14.17□□□□□ -0.14
CDC42EP3-201ENST00000295324 GFI1BQ5VTD9 330 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 PRORYQ9H606 182 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 GZMBP10144 247 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 ZNF134P52741 427 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 LYZL1Q6UWQ5 148 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 XCL2Q9UBD3 114 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 LY96Q9Y6Y9 160 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 SHANK1Q9Y566 2161 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 APOC4P55056 127 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 ZNF815PA8K554 130 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 MEGF9Q9H1U4 602 aa14.16□□□□□ -0.14
CDC42EP3-201ENST00000295324 C11orf53Q8IXP5 236 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 A0A1B0GW64 132 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 FAM120AOSQ5T036 256 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 Q8NA96 180 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 TMEM170AQ8WVE7 144 aa14.15□□□□□ -0.14
CDC42EP3-201ENST00000295324 LYL1P12980 280 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 OR11H6Q8NGC7 330 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 TSSC4Q9Y5U2 329 aaPredicted RBP14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 SRSF3P84103 164 aaKnown RBP14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 SEM1Q6ZVN7 128 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 Q8NFD4 153 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 A0A1B0GUS0 222 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 C1QL4Q86Z23 238 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 LINC00587B1AMM8 73 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 SERF1AO75920 110 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 LINC01551Q86U37 167 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
CDC42EP3-201ENST00000295324 WT1-ASQ06250 92 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 LHBP01229 141 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 DAD1P61803 113 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 TPSG1Q9NRR2 321 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 NHP2Q9NX24 153 aaKnown RBP14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 ANAPC13Q9BS18 74 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 FNDC4Q9H6D8 234 aaPredicted RBP14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 TMEM242Q9NWH2 141 aa14.13□□□□□ -0.15
CDC42EP3-201ENST00000295324 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 VCYO14598 125 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 ADMP35318 185 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 DENND4CQ5VZ89 1909 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 HIVEP2P31629 2446 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 NDUFAF3Q9BU61 184 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 POU2AF1Q16633 256 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 PAX2Q02962 417 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 FOXL1Q12952 345 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 ATRAIDQ6UW56 229 aa14.12□□□□□ -0.15
CDC42EP3-201ENST00000295324 ERCC8Q13216 396 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 LAGE3Q14657 143 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 LINC01559Q495D7 138 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 RASL11AQ6T310 242 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 Q86TA4 180 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 RNF182Q8N6D2 247 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 DPM2O94777 84 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 FAM90A2PQ658T7 463 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 CHCHD1Q96BP2 118 aaKnown RBP14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 CENPVL3A0A0U1RRI6 287 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 RHODO00212 210 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 C14orf178Q8N769 122 aaPredicted RBP14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 NRGNQ92686 78 aa14.11□□□□□ -0.15
CDC42EP3-201ENST00000295324 GHRHP01286 108 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 SFTA2Q6UW10 78 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 F5H768 121 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 SPINK13Q1W4C9 94 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 CKS1BP61024 79 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 SEC11AP67812 179 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 OR2K2Q8NGT1 345 aa14.1□□□□□ -0.15
CDC42EP3-201ENST00000295324 IGKV1-39P01597 117 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 IGKV1D-39P04432 117 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 CHTOPQ9Y3Y2 248 aaKnown RBP14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 SLC25A20O43772 301 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 C8orf86Q6ZUL3 223 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 NCR2O95944 276 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 TMEM86BQ8N661 226 aa14.09□□□□□ -0.15
CDC42EP3-201ENST00000295324 TRAV8-4A0A0B4J246 113 aa14.08□□□□□ -0.15
CDC42EP3-201ENST00000295324 D6R8Y8 96 aa14.08□□□□□ -0.15
CDC42EP3-201ENST00000295324 MED13Q9UHV7 2174 aa14.08□□□□□ -0.15
CDC42EP3-201ENST00000295324 TRBV19A0A075B6N1 114 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 IGHV7-4-1A0A0J9YVY3 117 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 ARMS2P0C7Q2 107 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 IFI27L1Q96BM0 104 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 LIME1Q9H400 295 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 SIGMAR1Q99720 223 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 IGHV4-38-2P0DP08 117 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 TRBV24-1A0A075B6N3 115 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
CDC42EP3-201ENST00000295324 KRTAP27-1Q3LI81 207 aa14.07□□□□□ -0.16
CDC42EP3-201ENST00000295324 TMEM75Q8N9X5 138 aa14.07□□□□□ -0.16
CDC42EP3-201ENST00000295324 CCL24O00175 119 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms