RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TEX37Q96LM6 180 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 IGKV3-15P01624 115 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 MSMBP08118 114 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 RNASE13Q5GAN3 156 aaKnown RBP1.93□□□□□ -2.1
CHD1-201ENST00000284049 U3KQK5 164 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 MIA3Q5JRA6 1907 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 TRAV30A0A087WSZ9 112 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 A6NIN4 97 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 ZNF736B4DX44 427 aaPredicted RBP1.93□□□□□ -2.1
CHD1-201ENST00000284049 APOC4-APOC2K7ER74 178 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 APOC2P02655 101 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 CD52P31358 61 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 TMEM244Q5VVB8 128 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 ZNF431Q8TF32 576 aaPredicted RBP1.93□□□□□ -2.1
CHD1-201ENST00000284049 SFT2D1Q8WV19 159 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 LPAR5Q9H1C0 372 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 ZNF586Q9NXT0 402 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 SCN3BQ9NY72 215 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 IGHV3-43A0A0B4J1X8 118 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 MT-ND4LP03901 98 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 HLA-EP13747 358 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 DYNLT3P51808 116 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 PKIAP61925 76 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 RPS25P62851 125 aaKnown RBP1.93□□□□□ -2.1
CHD1-201ENST00000284049 RRN3P1Q2M238 152 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 C2orf83Q53S99 150 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 OR2T35Q8NGX2 323 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 CIRBP-AS1Q8TBR5 109 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 BCL2L10Q9HD36 194 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 CEP350Q5VT06 3117 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 COL6A6A6NMZ7 2263 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 ARFGEF3Q5TH69 2177 aa1.93□□□□□ -2.1
CHD1-201ENST00000284049 TRBV7-6A0A0J9YX20 115 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 LOC107986453A0A1B0GWG9 222 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 C17orf51A8MQB3 221 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 H3BQF6 201 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 CORTO00230 105 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 PMP2P02689 132 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 RPS3P23396 243 aaKnown RBP eCLIP1.92□□□□□ -2.1
CHD1-201ENST00000284049 PCBD1P61457 104 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 ZNF141Q15928 474 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 COL5A1-AS1Q5SY13 56 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 ZNF660Q6AZW8 331 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 GPHB5Q86YW7 130 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 ZNF418Q8TF45 676 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 PRADC1Q9BSG0 188 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 TPRKBQ9Y3C4 175 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 FREM3P0C091 2139 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 TMEM235A6NFC5 223 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 ZNF73O43830 326 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 ZNF324O75467 553 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 LY6HO94772 140 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 P0C879 139 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 CXCL8P10145 99 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 MGST1P10620 155 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 GATA2P23769 480 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 MAL2Q969L2 176 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 TRAV41A0A0B4J266 112 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 IGKV1-12A0A0C4DH73 117 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 IGKV1D-12P01611 117 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 TLX1NBP0CAT3 122 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 LINC00313P59037 77 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 C14orf144Q96I85 54 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 GNB2P62879 340 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 MRPL51Q4U2R6 128 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 C9orf129Q5T035 196 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 RPL7L1Q6DKI1 246 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 STAG3L4Q8TBR4 150 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 C18orf15Q96N68 181 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 LHX9Q9NQ69 397 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 OR5AC2Q9NZP5 309 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 AP4S1Q9Y587 144 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 KMT2BQ9UMN6 2715 aaPredicted RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 A0A1B0GW64 132 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 C9JCJ5 164 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 CRISP3P54108 245 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 RPS11P62280 158 aaKnown RBP eCLIP1.92□□□□□ -2.1
CHD1-201ENST00000284049 DEFB103AP81534 67 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 RHOGP84095 191 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 FNDC9Q8TBE3 224 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 MRPL32Q9BYC8 188 aaKnown RBP1.92□□□□□ -2.1
CHD1-201ENST00000284049 SRCAPQ6ZRS2 3230 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 KIAA1549Q9HCM3 1950 aa1.92□□□□□ -2.1
CHD1-201ENST00000284049 GVINP1Q7Z2Y8 2422 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 A0A0J9YW62 118 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 FAM168BA1KXE4 195 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 H3BT86 120 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 H7C2G1 150 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CRYBB3P26998 211 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 CIRBPQ14011 172 aaKnown RBP1.91□□□□□ -2.1
CHD1-201ENST00000284049 C22orf39Q6P5X5 142 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 SCIMPQ6UWF3 145 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 OR4S1Q8NGB4 309 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 PSMF1Q92530 271 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 COX14Q96I36 57 aa1.91□□□□□ -2.1
CHD1-201ENST00000284049 OR4C12Q96R67 309 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms