RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ANXA2RQ3ZCQ2 193 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 DPM3Q9P2X0 92 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 ERG28Q9UKR5 140 aa12.13□□□□□ -0.47
CASC3-201ENST00000264645 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 H7C1H1 209 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 TMEM200BQ69YZ2 307 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 C9orf172C9J069 976 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 IGKV3-20P01619 116 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 SCGB1A1P11684 91 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 TMEM105Q8N8V8 129 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 IGF2BP2-AS1Q96M15 143 aa12.12□□□□□ -0.47
CASC3-201ENST00000264645 FXYD2P54710 66 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 KIAA1549Q9HCM3 1950 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 IGKV1OR2-108A0A075B7D4 117 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 CEND1Q8N111 149 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 UBTD1Q9HAC8 227 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 SIVA1O15304 175 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 LINC00310P59036 64 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 RNFT1Q5M7Z0 435 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 GTSF1Q8WW33 167 aa12.11□□□□□ -0.47
CASC3-201ENST00000264645 B5MCH6 92 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 C12orf74Q32Q52 190 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 PAX1P15863 534 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 RNF138Q8WVD3 245 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 GAFA1Q96PS6 74 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
CASC3-201ENST00000264645 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 C17orf58Q2M2W7 97 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
CASC3-201ENST00000264645 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 TIMM23O14925 209 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 GDF5OSQ5U4N7 250 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 CLEC19AQ6UXS0 136 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 NBR2O15453 112 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 PPP1R17O96001 155 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 ATP5G2Q06055 141 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 PPDPFLQ8WWR9 84 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 EML5Q05BV3 1969 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
CASC3-201ENST00000264645 C2CD3Q4AC94 2353 aa12.08□□□□□ -0.47
CASC3-201ENST00000264645 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.47
CASC3-201ENST00000264645 NTN3O00634 580 aaPredicted RBP12.08□□□□□ -0.48
CASC3-201ENST00000264645 Q8TCH9 128 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 LTAP01374 205 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 LYPD1Q8N2G4 141 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 FAM167A-AS1Q96KT0 104 aa12.08□□□□□ -0.48
CASC3-201ENST00000264645 PRSS46E5RG02 174 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 COL8A2P25067 703 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 SHANK2-AS3Q9BTD1 123 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 PF4V1P10720 104 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 EFNA4P52798 201 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 BSPH1Q075Z2 132 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
CASC3-201ENST00000264645 RNASE4P34096 147 aaKnown RBP12.07□□□□□ -0.48
CASC3-201ENST00000264645 PATE2Q6UY27 113 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 C17orf77Q96MU5 243 aa12.07□□□□□ -0.48
CASC3-201ENST00000264645 SLC25A16P16260 332 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 SPG11Q96JI7 2443 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 IGLL5B9A064 214 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 BRWD1-AS2P59051 145 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 IGLV2-8P01709 118 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 ERCC8Q13216 396 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 C14orf178Q8N769 122 aaPredicted RBP12.06□□□□□ -0.48
CASC3-201ENST00000264645 KLF12Q9Y4X4 402 aa12.06□□□□□ -0.48
CASC3-201ENST00000264645 IGHV1-8P0DP01 117 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 C11orf53Q8IXP5 236 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 TMEM75Q8N9X5 138 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 DKK1O94907 266 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 CNTFRP26992 372 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 CRYBA4P53673 196 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 FOXI2Q6ZQN5 318 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 TRBV20-1A0A075B6N2 111 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 DIAPH2-AS1Q14236 149 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 TRAV26-2A0A0B4J265 109 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 A0A0U1RRA0 63 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 P0C879 139 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 ID1P41134 155 aa12.05□□□□□ -0.48
CASC3-201ENST00000264645 IGHV1-3A0A0C4DH29 117 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 NPC2P61916 151 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 C2orf82Q6UX34 121 aa12.04□□□□□ -0.48
CASC3-201ENST00000264645 EEF1AKMT3Q96AZ1 226 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms