RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NTF3P20783 257 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 C8orf49Q96NF6 230 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 MIEN1Q9BRT3 115 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.53□□□□□ -0.4
UBE3D-201ENST00000237186 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 ARMS2P0C7Q2 107 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 CTRLP40313 264 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 MRPL52Q86TS9 123 aaKnown RBP12.53□□□□□ -0.4
UBE3D-201ENST00000237186 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 M0R2Z0 102 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 RNF224P0DH78 156 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 ZNF493Q6ZR52 646 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 CCL19Q99731 98 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 ASCL2Q99929 193 aa12.52□□□□□ -0.41
UBE3D-201ENST00000237186 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-201ENST00000237186 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-201ENST00000237186 RELQ04864 619 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-201ENST00000237186 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
UBE3D-201ENST00000237186 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 PAM16Q9Y3D7 125 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 C2orf70A6NJV1 201 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 SH2D1AO60880 128 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 CLEC19AQ6UXS0 136 aa12.51□□□□□ -0.41
UBE3D-201ENST00000237186 SPTAN1Q13813 2472 aaKnown RBP12.5□□□□□ -0.41
UBE3D-201ENST00000237186 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 ASH1LQ9NR48 2969 aaKnown RBP12.5□□□□□ -0.41
UBE3D-201ENST00000237186 TMEM189A5PLL7 270 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 RBAKDNA6NC62 111 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 M0R143 59 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 BRI3O95415 125 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 LINC00614P0C842 121 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
UBE3D-201ENST00000237186 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 U3KQE9 123 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 CSMD1Q96PZ7 3565 aa12.5□□□□□ -0.41
UBE3D-201ENST00000237186 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 FAM223BA6NKX1 122 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 BTF3P20290 206 aaKnown RBP12.49□□□□□ -0.41
UBE3D-201ENST00000237186 BMI1P35226 326 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 ATP5G2Q06055 141 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 FAM223AQ8IWN6 122 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 SNHG12Q9BXW3 62 aa12.49□□□□□ -0.41
UBE3D-201ENST00000237186 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
UBE3D-201ENST00000237186 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 VGLL1Q99990 258 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 FLNCQ14315 2725 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 A0A1B0GV90 55 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 CRXO43186 299 aaPredicted RBP12.48□□□□□ -0.41
UBE3D-201ENST00000237186 IGF1P05019 195 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 OR5AL1P0C617 328 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
UBE3D-201ENST00000237186 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
UBE3D-201ENST00000237186 USP9XQ93008 2570 aaPredicted RBP12.47□□□□□ -0.41
UBE3D-201ENST00000237186 AKAP6Q13023 2319 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 EREGO14944 169 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 HLA-DMBP28068 263 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 LINC00469Q8N7U9 141 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 METTL26Q96S19 204 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 EPG5Q9HCE0 2579 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 ZNF462Q96JM2 2506 aa12.47□□□□□ -0.41
UBE3D-201ENST00000237186 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.41
UBE3D-201ENST00000237186 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.41
UBE3D-201ENST00000237186 SPATA45Q537H7 98 aa12.46□□□□□ -0.41
UBE3D-201ENST00000237186 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.41
UBE3D-201ENST00000237186 ZNF705AQ6ZN79 300 aaPredicted RBP12.46□□□□□ -0.41
UBE3D-201ENST00000237186 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
UBE3D-201ENST00000237186 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.41
UBE3D-201ENST00000237186 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 M0QZK8 103 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 ZNF80P51504 273 aaPredicted RBP12.46□□□□□ -0.42
UBE3D-201ENST00000237186 ATP5J2P56134 94 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 IGFL4Q6B9Z1 124 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 BRD3OSQ6XYD6 125 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 PSMG3-AS1Q96PY0 264 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 U3KQK5 164 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 COL12A1Q99715 3063 aa12.46□□□□□ -0.42
UBE3D-201ENST00000237186 MYO18BQ8IUG5 2567 aa12.45□□□□□ -0.42
UBE3D-201ENST00000237186 IGHV4-30-2A0A087WSY4 118 aa12.45□□□□□ -0.42
UBE3D-201ENST00000237186 M0QZ24 198 aa12.45□□□□□ -0.42
UBE3D-201ENST00000237186 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
UBE3D-201ENST00000237186 TMEM70Q9BUB7 260 aa12.45□□□□□ -0.42
UBE3D-201ENST00000237186 C20orf202A1L168 122 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 A6NDX4 124 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 H3BUA1 57 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 IGHG2P01859 326 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 KLHDC1Q8N7A1 406 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 Q8TAT8 98 aa12.44□□□□□ -0.42
UBE3D-201ENST00000237186 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms