RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 NF1P21359 2839 aa13.11□□□□□ -0.31
GAPDH-201ENST00000229239 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 FAM223BA6NKX1 122 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 A8MWP6 167 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 M0QZK8 103 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 GATA3P23771 443 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-201ENST00000229239 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 FAM223AQ8IWN6 122 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
GAPDH-201ENST00000229239 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 SCGB1D1O95968 90 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 GPX1P07203 203 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 NAGKQ9UJ70 344 aa13.1□□□□□ -0.31
GAPDH-201ENST00000229239 A0A087X0K7 114 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 CLEC3BP05452 202 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 MSMBP08118 114 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 GPR183P32249 361 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 DEFA6Q01524 100 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 SLAQ13239 276 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
GAPDH-201ENST00000229239 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
GAPDH-201ENST00000229239 H3BUA1 57 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 HAX1O00165 279 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 FOSL1P15407 271 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 GTSF1Q8WW33 167 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 Q96MF0 132 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 TRAV41A0A0B4J266 112 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 DDTP30046 118 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 ATP5G2Q06055 141 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 KIAA1644Q3SXP7 199 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
GAPDH-201ENST00000229239 G3V318 75 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 ZC2HC1AQ96GY0 325 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 CCDC140Q96MF4 163 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 CLEC5AQ9NY25 188 aa13.07□□□□□ -0.32
GAPDH-201ENST00000229239 NIPBLQ6KC79 2804 aaeCLIP13.07□□□□□ -0.326e-7■□□□□ 10.3
GAPDH-201ENST00000229239 B4DSR2 109 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF324O75467 553 aaPredicted RBP13.06□□□□□ -0.32
GAPDH-201ENST00000229239 IGF1P05019 195 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 CAMPP49913 170 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 RIGQ13278 110 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 C18orf32Q8TCD1 76 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 ALKBH7Q9BT30 221 aaPredicted RBP13.06□□□□□ -0.32
GAPDH-201ENST00000229239 TRAV20A0A0B4J274 112 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 A0A1W2PS18 150 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 M0R3E3 92 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 BUB3O43684 328 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 SLC25A16P16260 332 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 Q6ZWC4 215 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 PGLYRP4Q96LB8 373 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
GAPDH-201ENST00000229239 LINC01548A6NM66 108 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 F2Z2F3 143 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 AMTP48728 403 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 RPS20P60866 119 aaKnown RBP13.05□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF664Q8N3J9 261 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 BORCS7Q96B45 105 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 METTL26Q96S19 204 aa13.05□□□□□ -0.32
GAPDH-201ENST00000229239 A0A1B0GUT8 65 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 CHEK1O14757 476 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 RAB4AP20338 218 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 BMI1P35226 326 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 CLEC19AQ6UXS0 136 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 A6NDX4 124 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-201ENST00000229239 RIPPLY3P57055 190 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 SRSF2Q01130 221 aaKnown RBP13.04□□□□□ -0.32
GAPDH-201ENST00000229239 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
GAPDH-201ENST00000229239 USMG5Q96IX5 58 aa13.04□□□□□ -0.32
GAPDH-201ENST00000229239 ZANQ9Y493 2812 aa13.03□□□□□ -0.32
GAPDH-201ENST00000229239 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-201ENST00000229239 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
GAPDH-201ENST00000229239 REC114Q7Z4M0 266 aa13.03□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF705FA8MVS1 300 aaPredicted RBP13.02□□□□□ -0.32
GAPDH-201ENST00000229239 IGHG2P01859 326 aa13.02□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF705DP0CH99 300 aaPredicted RBP13.02□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF705BP0CI00 300 aaPredicted RBP13.02□□□□□ -0.32
GAPDH-201ENST00000229239 PRR25Q96S07 402 aa13.02□□□□□ -0.32
GAPDH-201ENST00000229239 NRN1Q9NPD7 142 aa13.02□□□□□ -0.32
GAPDH-201ENST00000229239 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.32
GAPDH-201ENST00000229239 ZNF580Q9UK33 172 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms