RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CRIP1P50238 77 aa17.32■□□□□ 0.36
CCDC9-201ENST00000221922 ARMS2P0C7Q2 107 aa17.32■□□□□ 0.36
CCDC9-201ENST00000221922 S100A7P31151 101 aa17.32■□□□□ 0.36
CCDC9-201ENST00000221922 SAA4P35542 130 aa17.32■□□□□ 0.36
CCDC9-201ENST00000221922 HINT1P49773 126 aaPredicted RBP17.32■□□□□ 0.36
CCDC9-201ENST00000221922 ORAOV1Q8WV07 137 aa17.32■□□□□ 0.36
CCDC9-201ENST00000221922 IGSF10Q6WRI0 2623 aa17.31■□□□□ 0.36
CCDC9-201ENST00000221922 USP24Q9UPU5 2620 aa17.31■□□□□ 0.36
CCDC9-201ENST00000221922 Q6AWC8 147 aa17.31■□□□□ 0.36
CCDC9-201ENST00000221922 AAMDCQ9H7C9 122 aa17.31■□□□□ 0.36
CCDC9-201ENST00000221922 FAM110DQ8TAY7 271 aaPredicted RBP17.3■□□□□ 0.36
CCDC9-201ENST00000221922 CCL19Q99731 98 aa17.3■□□□□ 0.36
CCDC9-201ENST00000221922 ZNF138P52744 262 aa17.3■□□□□ 0.36
CCDC9-201ENST00000221922 PET117Q6UWS5 81 aa17.3■□□□□ 0.36
CCDC9-201ENST00000221922 SERTM2A0A1B0GWG4 89 aa17.29■□□□□ 0.36
CCDC9-201ENST00000221922 RPL7P18124 248 aaKnown RBP17.29■□□□□ 0.36
CCDC9-201ENST00000221922 PSG9Q00887 426 aa17.29■□□□□ 0.36
CCDC9-201ENST00000221922 PIMREGQ9BSJ6 248 aa17.29■□□□□ 0.36
CCDC9-201ENST00000221922 TMUB1Q9BVT8 246 aa17.29■□□□□ 0.36
CCDC9-201ENST00000221922 TMEM191AQ9H0A3 160 aa17.29■□□□□ 0.36
CCDC9-201ENST00000221922 OR2T8A6NH00 312 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 KLK9Q2XQG4 91 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 MAP1LC3CQ9BXW4 147 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 HSPB8Q9UJY1 196 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 KLK9Q9UKQ9 250 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 M0R3E3 92 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 NPFFO15130 113 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 ASCL2Q99929 193 aa17.28■□□□□ 0.36
CCDC9-201ENST00000221922 NDUFS8O00217 210 aa17.27■□□□□ 0.36
CCDC9-201ENST00000221922 CTSGP08311 255 aa17.27■□□□□ 0.36
CCDC9-201ENST00000221922 CSN1S1P47710 185 aa17.27■□□□□ 0.36
CCDC9-201ENST00000221922 BCL6BQ8N143 479 aaPredicted RBP17.27■□□□□ 0.36
CCDC9-201ENST00000221922 ARL6IP6Q8N6S5 226 aa17.27■□□□□ 0.36
CCDC9-201ENST00000221922 RABAC1Q9UI14 185 aa17.27■□□□□ 0.36
CCDC9-201ENST00000221922 IGHV3-23P01764 117 aa17.27■□□□□ 0.35
CCDC9-201ENST00000221922 PAX8Q06710 450 aa17.27■□□□□ 0.35
CCDC9-201ENST00000221922 UNQ5815/PRO19632Q6UWF5 114 aa17.27■□□□□ 0.35
CCDC9-201ENST00000221922 ZNF493Q6ZR52 646 aa17.27■□□□□ 0.35
CCDC9-201ENST00000221922 C10orf105Q8TEF2 133 aa17.26■□□□□ 0.35
CCDC9-201ENST00000221922 CENPVL3A0A0U1RRI6 287 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 hDV102S1A0JD36 115 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 PIP4P2Q8N4L2 257 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 C8orf49Q96NF6 230 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 PPP1R14DQ9NXH3 145 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 COX11Q9Y6N1 276 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 DOPEY1Q5JWR5 2465 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 CT45A10P0DMU9 189 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 COX8CQ7Z4L0 72 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 SPOCK3Q9BQ16 436 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 AP5S1Q9NUS5 200 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 MED13LQ71F56 2210 aa17.25■□□□□ 0.35
CCDC9-201ENST00000221922 AKAP6Q13023 2319 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 ATP6V0E1O15342 81 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 CSN3P07498 182 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 ECSCRQ19T08 205 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 IGHV4-61A0A0C4DH41 118 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 FBLL1A6NHQ2 334 aaKnown RBP17.24■□□□□ 0.35
CCDC9-201ENST00000221922 LINC01545Q5VT33 79 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 ZNF502Q8TBZ5 544 aa17.24■□□□□ 0.35
CCDC9-201ENST00000221922 HSBP1L1C9JCN9 74 aa17.23■□□□□ 0.35
CCDC9-201ENST00000221922 C15orf32Q32M92 178 aa17.23■□□□□ 0.35
CCDC9-201ENST00000221922 PRB4P10163 310 aaPredicted RBP17.22■□□□□ 0.35
CCDC9-201ENST00000221922 ZNF738Q8NE65 137 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 MS4A6AQ9H2W1 248 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 TCF21O43680 179 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 RAB9AP51151 201 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 RHOGP84095 191 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 SLC25A34Q6PIV7 304 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 CLEC2AQ6UVW9 174 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 ZNF747Q9BV97 191 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 SCRT2Q9NQ03 307 aa17.22■□□□□ 0.35
CCDC9-201ENST00000221922 ABCA2Q9BZC7 2435 aa17.21■□□□□ 0.35
CCDC9-201ENST00000221922 U3KQK5 164 aa17.21■□□□□ 0.35
CCDC9-201ENST00000221922 GPR183P32249 361 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 ATP5J2P56134 94 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 TPPP3Q9BW30 176 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 TP73-AS1Q9UF72 201 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 CACNA1BQ00975 2339 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 TMEM189A5PLL7 270 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 SH2D1AO60880 128 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 LYZL1Q6UWQ5 148 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 FA2HQ7L5A8 372 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 PRSS3P2Q8NHM4 247 aa17.2■□□□□ 0.34
CCDC9-201ENST00000221922 ASH1LQ9NR48 2969 aaKnown RBP17.19■□□□□ 0.34
CCDC9-201ENST00000221922 IGHV1-69DA0A0B4J2H0 117 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 CCL25O15444 150 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 IGHV1-69P01742 117 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 SAPCD1Q5SSQ6 148 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 Q6ZVH6 145 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 OR10AG1Q8NH19 301 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 C5orf56Q8N8D9 126 aa17.19■□□□□ 0.34
CCDC9-201ENST00000221922 UBE2V1Q13404 147 aa17.18■□□□□ 0.34
CCDC9-201ENST00000221922 MPV17L2Q567V2 206 aa17.18■□□□□ 0.34
CCDC9-201ENST00000221922 FAM104BQ5XKR9 115 aa17.18■□□□□ 0.34
CCDC9-201ENST00000221922 MCRIP2Q9BUT9 160 aaKnown RBP17.18■□□□□ 0.34
CCDC9-201ENST00000221922 EPG5Q9HCE0 2579 aa17.18■□□□□ 0.34
CCDC9-201ENST00000221922 PTTG1IPP53801 180 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 EEF1AKMT3Q96AZ1 226 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 PRR25Q96S07 402 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 MOB4Q9Y3A3 225 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms