RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 DNPH1O43598 174 aa11.71□□□□□ -0.54
PTPRA-201ENST00000216877 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.54
PTPRA-201ENST00000216877 KIR2DS2P43631 304 aa11.71□□□□□ -0.54
PTPRA-201ENST00000216877 MRPL51Q4U2R6 128 aaKnown RBP11.7□□□□□ -0.54
PTPRA-201ENST00000216877 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 ATP1A1-AS1Q5TC04 95 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 MRPL35Q9NZE8 188 aaKnown RBP11.7□□□□□ -0.54
PTPRA-201ENST00000216877 CACNA1AO00555 2505 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 FAM90A9PA6NNJ1 464 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 SRRM4A7MD48 611 aaKnown RBP11.7□□□□□ -0.54
PTPRA-201ENST00000216877 SAA1P0DJI8 122 aaPredicted RBP11.7□□□□□ -0.54
PTPRA-201ENST00000216877 B3GALT5-AS1P59052 145 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 Q86TA4 180 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 FBXL15Q9H469 300 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 MAP1LC3AQ9H492 121 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 CT83Q5H943 113 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 TMEM105Q8N8V8 129 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 GFRA4Q9GZZ7 299 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
PTPRA-201ENST00000216877 UPK2O00526 184 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 FAM110AQ9BQ89 295 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 MLST8Q9BVC4 326 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 ZNF492Q9P255 531 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 IGLV3-12A0A075B6K2 115 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 HLA-DRB4P13762 266 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 CD177Q8N6Q3 437 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 TMEM158Q8WZ71 300 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
PTPRA-201ENST00000216877 HLA-DRB4X5D2U9 266 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 RBP4P02753 201 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 ZNF688P0C7X2 276 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 SUB1P53999 127 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPRA-201ENST00000216877 ATP5J2P56134 94 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 LOXL3P58215 753 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 OR1L8Q8NGR8 309 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 MYOZ3Q8TDC0 251 aa11.69□□□□□ -0.54
PTPRA-201ENST00000216877 M0R3E3 92 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 VKORC1Q9BQB6 163 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 SPG11Q96JI7 2443 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
PTPRA-201ENST00000216877 EXPH5Q8NEV8 1989 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 FABP5P3A8MUU1 101 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 IFITM1P13164 125 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
PTPRA-201ENST00000216877 ORM1P02763 201 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
PTPRA-201ENST00000216877 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
PTPRA-201ENST00000216877 DEFB109BQ30KR1 87 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 C2orf83Q53S99 150 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 HES7Q9BYE0 225 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
PTPRA-201ENST00000216877 C15orf65H3BRN8 121 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 BRI3O95415 125 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 ODF1Q14990 250 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
PTPRA-201ENST00000216877 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 MED13Q9UHV7 2174 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 IL11RAQ14626 422 aa11.67□□□□□ -0.54
PTPRA-201ENST00000216877 TRAV4A0A0B4J268 109 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 IGF2RP11717 2491 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 M0QXV9 152 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
PTPRA-201ENST00000216877 ZNF714Q96N38 554 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 ONECUT1Q9UBC0 465 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 CEP192Q8TEP8 1941 aa11.66□□□□□ -0.54
PTPRA-201ENST00000216877 IGHV1-45A0A0A0MS14 117 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 E7EUB6 86 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 IGLV3-19P01714 112 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 CXXC4Q9H2H0 198 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 IGHV3-72A0A0B4J1Y9 119 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 Q1RN00 199 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 PROCRQ9UNN8 238 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 DKK1O94907 266 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 EMP1P54849 157 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 DIAPH2-AS1Q14236 149 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
PTPRA-201ENST00000216877 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.55
PTPRA-201ENST00000216877 C9JAW5 83 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 MSRB1Q9NZV6 116 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 KLF12Q9Y4X4 402 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 CRYGCP07315 174 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
PTPRA-201ENST00000216877 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
PTPRA-201ENST00000216877 HIGD1AQ9Y241 93 aa11.64□□□□□ -0.55
PTPRA-201ENST00000216877 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms