RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 C14orf144Q96I85 54 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 RTBDNQ9BSG5 229 aaPredicted RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GFRA4Q9GZZ7 299 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 SH2D1AO60880 128 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 NMSQ5H8A3 153 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 PLA2G2CQ5R387 149 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 SPANXCQ9NY87 97 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 CACNA1IQ9P0X4 2223 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 SPTBP11277 2137 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 Q0VFX4 171 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 SAMD5Q5TGI4 173 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 ZFAND6Q6FIF0 208 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 Q8TCH9 128 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 SHANK2-AS3Q9BTD1 123 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
GABRB3-218ENST00000635994 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 WISP1O95388 367 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 CFHR2P36980 270 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 CDKN1BP46527 198 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 CSRP3P50461 194 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 C14orf177Q52M58 125 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 LYZL1Q6UWQ5 148 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 DMRTC2Q8IXT2 367 aaPredicted RBP5.13□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 H2BFSP57053 126 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 HERVK_113P63121 156 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 MRPL23Q16540 153 aaKnown RBP5.13□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF474Q6S9Z5 364 aaPredicted RBP5.13□□□□□ -1.59
GABRB3-218ENST00000635994 TREML4Q6UXN2 200 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 C14orf178Q8N769 122 aaPredicted RBP5.13□□□□□ -1.59
GABRB3-218ENST00000635994 SCRT1Q9BWW7 348 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 WNK2Q9Y3S1 2297 aa5.13□□□□□ -1.59
GABRB3-218ENST00000635994 IGHV3-64A0A075B6Q5 118 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV2D-24A0A075B6R9 120 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 PRSS29PA6NIE9 313 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 C1QTNF9P0C862 333 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 SELLP14151 372 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 FXYD7P58549 80 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 C17orf82Q86X59 251 aaPredicted RBP5.12□□□□□ -1.59
GABRB3-218ENST00000635994 STPG4Q8N801 248 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 WFDC12Q8WWY7 111 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 TMEM242Q9NWH2 141 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 C5orf63A6NC05 138 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 COL4A4P53420 1690 aaPredicted RBP5.12□□□□□ -1.59
GABRB3-218ENST00000635994 A0A1B0GV90 55 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE12BA1L429 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 SERF1AO75920 110 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE7O76087 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE12FP0CL80 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE12GP0CL81 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE12IP0CL82 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 MPV17L2Q567V2 206 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 GGNQ86UU5 652 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV1D-43A0A0B4J1Z2 117 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 TRAV1-1A0A0B4J248 108 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 ETDCA0A1B0GVM5 59 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 A8MXK9 166 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 D6R8Y8 96 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 E7EQL1 145 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 ICOSQ9Y6W8 199 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 NLRC5Q86WI3 1866 aa5.12□□□□□ -1.59
GABRB3-218ENST00000635994 SNAI2O43623 268 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 ANGP03950 147 aaKnown RBP5.11□□□□□ -1.59
GABRB3-218ENST00000635994 COL8A2P25067 703 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 NDPQ00604 133 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 C1orf122Q6ZSJ8 110 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF837Q96EG3 531 aaPredicted RBP5.11□□□□□ -1.59
GABRB3-218ENST00000635994 VPREB3Q9UKI3 123 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV1D-13A0A0B4J2D9 117 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 PINLYPA6NC86 204 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 F8VVB4 439 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 F8VWA3 439 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 NDUFS5O43920 106 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV1-13P0DP09 117 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 FUSP35637 526 aaKnown RBP eCLIP5.11□□□□□ -1.59
GABRB3-218ENST00000635994 TIRAPP58753 221 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 FAM19A2Q8N3H0 131 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 C15orf53Q8NAA6 179 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 NDUFAF3Q9BU61 184 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 SCRT2Q9NQ03 307 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 HEATR1Q9H583 2144 aaKnown RBP5.11□□□□□ -1.59
GABRB3-218ENST00000635994 HEATR5BQ9P2D3 2071 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 TRAV25A0A0B4J276 109 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 RAMP3O60896 148 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 ATP5G1P05496 136 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 PAX9P55771 341 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 CHKB-CPT1BH3BT56 60 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 ARMS2P0C7Q2 107 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 BOD1L2Q8IYS8 172 aa5.11□□□□□ -1.59
GABRB3-218ENST00000635994 BCL6BQ8N143 479 aaPredicted RBP5.11□□□□□ -1.59
GABRB3-218ENST00000635994 TMEM75Q8N9X5 138 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms