RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 GTSF1Q8WW33 167 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 IL22RA2Q969J5 263 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 RPUSD4Q96CM3 377 aaKnown RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 GFI1Q99684 422 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 SPXQ9BT56 116 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 CHCHD7Q9BUK0 85 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 PDCD10Q9BUL8 212 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 PBDC1Q9BVG4 233 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 KCNK15Q9H427 330 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ENY2Q9NPA8 101 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 PLCXD1Q9NUJ7 323 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 RNF24Q9Y225 148 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 AK6Q9Y3D8 172 aaKnown RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 AP4S1Q9Y587 144 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 ORC6Q9Y5N6 252 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 TMEM56-RWDD3S4R434 201 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 U3KQ87 197 aa1.46□□□□□ -2.18
CPNE3-211ENST00000621526 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
CPNE3-211ENST00000621526 MUC17Q685J3 4493 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGLV1-50A0A075B6I6 118 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-64A0A075B6Q5 118 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV2D-24A0A075B6R9 120 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV1D-37A0A075B6S9 117 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 A0A087X0K7 114 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV12-3A0A0B4J271 114 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 PNMA8CA0A1B0GUJ8 204 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 LOC100130705A0A1B0GUX0 176 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 TRBV6-4A0A1B0GX49 114 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 ZFP92A6NM28 416 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IFITM5A6NNB3 132 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 GABARAPH6UMI1 98 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 GPR31O00270 319 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 SSX5O60225 188 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 MPDU1O75352 247 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 WBP4O75554 376 aaKnown RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 GABARAPO95166 117 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IFNA7P01567 189 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV1-39P01597 117 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGHV3-53P01767 116 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV1D-39P04432 117 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 PRSS1P07477 247 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 HSMCR30P0CW71 290 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CT45A10P0DMU9 189 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 RPL7P18124 248 aaKnown RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CXCL2P19875 107 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CALB2P22676 271 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 HRH1P35367 487 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 LEPP41159 167 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 UCP3P55916 312 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 TAS2R20P59543 309 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CTAG1AP78358 180 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF90Q03938 601 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 INSL4Q14641 139 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 TRAM1Q15629 374 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 GPR107Q5VW38 600 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 IGFL4Q6B9Z1 124 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 DAZ4Q86SG3 579 aaKnown RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 S100A7AQ86SG5 101 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 LGI3Q8N145 548 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 NANOGP1Q8N7R0 232 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 OR5H2Q8NGV7 314 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 SPACA4Q8TDM5 124 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CHAC2Q8WUX2 184 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 APH1BQ8WW43 257 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 NRG4Q8WWG1 115 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 SLC25A38Q96DW6 304 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 ZNF479Q96JC4 524 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 SLC35E1Q96K37 410 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 LINC00477Q96M19 166 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 TRGV9Q99603 122 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 ATG5Q9H1Y0 275 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 OR51M1Q9H341 326 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 MED4Q9NPJ6 270 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 DAZ3Q9NR90 486 aaKnown RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 ELF5Q9UKW6 265 aaPredicted RBP1.45□□□□□ -2.18
CPNE3-211ENST00000621526 POMPQ9Y244 141 aa1.45□□□□□ -2.18
CPNE3-211ENST00000621526 NEBP20929 6669 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 IGKV1OR2-108A0A075B7D4 117 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 A0A0A6YYH2 397 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV1-1A0A0B4J248 108 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRAV4A0A0B4J268 109 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 TRBV7-9A0A0J9YWB2 115 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CRYM-AS1A6NIL9 109 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 A6NJ64 397 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 KLLNB2CW77 178 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 USP17L23D6RBM5 183 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 ANKRD65E5RJM6 399 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 PDCD5O14737 125 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 RGS10O43665 173 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 B3GALNT1O75752 331 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 RLN1P04808 185 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 HOXB5P09067 269 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 OR10J4P0C629 311 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CHTF8P0CG12 524 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 SMIM18P0DKX4 95 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 CRYGAP11844 174 aa1.44□□□□□ -2.18
CPNE3-211ENST00000621526 GATA1P15976 413 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms