RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
TNFAIP3-208ENST00000615468 JPT1Q9UK76 154 aa8.33□□□□□ -1.08
TNFAIP3-208ENST00000615468 E9PLD3 99 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 MPV17P39210 176 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 FOXI1Q12951 378 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 MBNL2Q5VZF2 373 aaKnown RBP8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 TMEM213A2RRL7 107 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 FAM90A27PA6NNH2 459 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 OR11H12B2RN74 326 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 NDUFS7O75251 213 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 CT45A10P0DMU9 189 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 UTF1Q5T230 341 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZFAND6Q6FIF0 208 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 PIP4P2Q8N4L2 257 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 OR11H1Q8NG94 326 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 OR11H2Q8NH07 326 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 A0A1B0GW15 77 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 IGKV1-16P04430 117 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 PTH2Q96A98 100 aa8.32□□□□□ -1.08
TNFAIP3-208ENST00000615468 C15orf65H3BRN8 121 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 XGP55808 180 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZNF766Q5HY98 468 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 Q6ZUT4 128 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 UPK2O00526 184 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 C2orf83Q53S99 150 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 DEFB108BQ8NET1 73 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 CALYQ9NYX4 217 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 ERG28Q9UKR5 140 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 CFAP47Q6ZTR5 3102 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 TRBV20-1A0A075B6N2 111 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 KLF14Q8TD94 323 aaPredicted RBP8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 MLST8Q9BVC4 326 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 ADAMTS20P59510 1910 aa8.31□□□□□ -1.08
TNFAIP3-208ENST00000615468 TRBV7-9A0A0J9YWB2 115 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 NPIPB5A8MRT5 1133 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 LYZL6O75951 148 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 IL4P05112 153 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 ARL3P36405 182 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 LEPP41159 167 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 HCP5Q6MZN7 132 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 Q71RC1 249 aaPredicted RBP8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 CD177Q8N6Q3 437 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZNF714Q96N38 554 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 C1QTNF4Q9BXJ3 329 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 A0A096LNJ9 63 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 A6NJY4 79 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 SS18L1O75177 396 aaPredicted RBP8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 TSPAN13O95857 204 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 IGKCP01834 107 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 LYZP61626 148 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 DEFB109BQ30KR1 87 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 CACNG8Q8WXS5 425 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 DDB2Q92466 427 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 HARBI1Q96MB7 349 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 CXXC4Q9H2H0 198 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 LAMA5O15230 3695 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 PRRG2O14669 202 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 SAA1P0DJI8 122 aaPredicted RBP8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 MEOX1P50221 254 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 OR1L8Q8NGR8 309 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 ZNRD1Q9P1U0 126 aa8.3□□□□□ -1.08
TNFAIP3-208ENST00000615468 KLRD1Q13241 179 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 TWIST1Q15672 202 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 KLF17Q5JT82 389 aaPredicted RBP8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 Q86TA4 180 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 IGF2RP11717 2491 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 SRRM4A7MD48 611 aaKnown RBP8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 WISP2O76076 250 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 DSPP15924 2871 aaKnown RBP8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 TTC32Q5I0X7 151 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 CNEP1R1Q8N9A8 125 aa8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 SPTAN1Q13813 2472 aaKnown RBP8.29□□□□□ -1.08
TNFAIP3-208ENST00000615468 TRAV40A0A0B4J280 105 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 RPEQ96AT9 228 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 TTTY12Q9BZ98 90 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 CDIP1Q9H305 208 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 NDUFA3O95167 84 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 NPYP01303 97 aa8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
TNFAIP3-208ENST00000615468 NCBP2LA6PVI3 153 aaKnown RBP8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 DPM2O94777 84 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms