RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TMEM52Q8NDY8 209 aa4.08□□□□□ -1.76
VPS13D-213ENST00000613099 METRNQ9UJH8 293 aa4.08□□□□□ -1.76
VPS13D-213ENST00000613099 EBLN2Q6P2I7 272 aa4.08□□□□□ -1.76
VPS13D-213ENST00000613099 TM2D2Q9BX73 214 aa4.08□□□□□ -1.76
VPS13D-213ENST00000613099 LOXL3P58215 753 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 SPEM2Q0P670 501 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PCP2Q8IVA1 136 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 EML6Q6ZMW3 1958 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 NDUFS7O75251 213 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 IGHG2P01859 326 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PRR32B1ATL7 298 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 FGF6P10767 208 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM42Q69YG0 159 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 SHISA8B8ZZ34 492 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 SMIM10L1P0DMW3 83 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 SMIM10Q96HG1 83 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 RCHY1Q96PM5 261 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 UBE2L6O14933 153 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1D-16P01601 117 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 TRAV8-3A0A0A6YYJ7 113 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 MUC7Q8TAX7 377 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM141Q96I45 108 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-213ENST00000613099 TREML4Q6UXN2 200 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 CFC1BP0CG36 223 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 CFC1P0CG37 223 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 FHL5Q5TD97 284 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PIFOQ8TCI5 191 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 VSIG2Q96IQ7 327 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PDE6HQ13956 83 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 RNF186Q9NXI6 227 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 CT62P0C5K7 136 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF138P52744 262 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 ACP7Q6ZNF0 438 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 ZAR1Q86SH2 424 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PRDM14Q9GZV8 571 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 PLA2G2EQ9NZK7 142 aa4.07□□□□□ -1.76
VPS13D-213ENST00000613099 CFHR2P36980 270 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TM4SF19Q96DZ7 209 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 A0A1W2PR77 199 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 FAM104BQ5XKR9 115 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TRBV25-1A0A075B6N4 114 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 LINC01555Q8NAE3 123 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 LEPROTO15243 131 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 LYPD3O95274 346 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 C8orf31Q8N9H6 132 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 PCDH15Q96QU1 1955 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 A0A0A6YYD4 124 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 VCYO14598 125 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 DLL3Q9NYJ7 618 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TRBV6-6A0A0A6YYG2 114 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 PRSS46E5RG02 174 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 VWC2Q2TAL6 325 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TET1Q8NFU7 2136 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 PTPRSQ13332 1948 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 LMO1P25800 156 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 CHCHD2Q9Y6H1 151 aaPredicted RBP4.06□□□□□ -1.76
VPS13D-213ENST00000613099 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 MCRIP2Q9BUT9 160 aaKnown RBP4.06□□□□□ -1.76
VPS13D-213ENST00000613099 FAM240AA0A1B0GVK7 77 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TEX36Q5VZQ5 186 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 C20orf78Q9BR46 151 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 MGST3O14880 152 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 UBL5Q9BZL1 73 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 CELA3BP08861 270 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 TMEM196Q5HYL7 178 aa4.06□□□□□ -1.76
VPS13D-213ENST00000613099 hADV29S1A0JD25 119 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 TCRAP04437 139 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 C1orf61Q13536 156 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 TRBV10-2A0A0K0K1G8 114 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 Q8N8P6 123 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 GPHA2Q96T91 129 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 TRAV40A0A0B4J280 105 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 LINC00694P0DN24 101 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 ZNF329Q86UD4 541 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 LINC00527Q9UJ94 153 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 DSCAML1Q8TD84 2053 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 A0A087WX48 190 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 LYPD1Q8N2G4 141 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 RNF152Q8N8N0 203 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 RPUSD1Q9UJJ7 312 aaKnown RBP4.05□□□□□ -1.76
VPS13D-213ENST00000613099 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1D-8A0A087WSZ0 117 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 CNEP1R1Q8N9A8 125 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 FOXA2Q9Y261 457 aaPredicted RBP4.05□□□□□ -1.76
VPS13D-213ENST00000613099 F8WDY8 70 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 CFHR1Q03591 330 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 F8P00451 2351 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 COX6A1P12074 109 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 EGR4Q05215 589 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1D-13A0A0B4J2D9 117 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 VWC2LB2RUY7 222 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 NDUFC1O43677 76 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 IGKV1-13P0DP09 117 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 SPINK2P20155 84 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 TCF15Q12870 199 aa4.05□□□□□ -1.76
VPS13D-213ENST00000613099 C17orf98A8MV24 154 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms