RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 GAGE12BA1L429 117 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 H3BRN7 92 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 ZNF701M0R085 212 aaPredicted RBP10.96□□□□□ -0.65
HDDC2-210ENST00000609574 PITX3O75364 302 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 GAGE7O76087 117 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 CXCL3P19876 107 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
HDDC2-210ENST00000609574 SELENOTP62341 195 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 TMED4Q7Z7H5 227 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 RNASE8Q8TDE3 154 aaKnown RBP10.96□□□□□ -0.65
HDDC2-210ENST00000609574 FRZBQ92765 325 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 RPUSD4Q96CM3 377 aaKnown RBP10.96□□□□□ -0.65
HDDC2-210ENST00000609574 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
HDDC2-210ENST00000609574 HERC1Q15751 4861 aa10.95□□□□□ -0.66
HDDC2-210ENST00000609574 CTDSP2O14595 271 aa10.95□□□□□ -0.66
HDDC2-210ENST00000609574 IFNA5P01569 189 aa10.95□□□□□ -0.66
HDDC2-210ENST00000609574 VAMP1P23763 118 aa10.95□□□□□ -0.66
HDDC2-210ENST00000609574 CTF1Q16619 201 aa10.95□□□□□ -0.66
HDDC2-210ENST00000609574 A0A087X0K7 114 aa10.94□□□□□ -0.66
HDDC2-210ENST00000609574 TMEM128Q5BJH2 165 aa10.94□□□□□ -0.66
HDDC2-210ENST00000609574 TMEM182Q6ZP80 229 aaPredicted RBP10.94□□□□□ -0.66
HDDC2-210ENST00000609574 KRTAP1-5Q9BYS1 174 aa10.94□□□□□ -0.66
HDDC2-210ENST00000609574 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
HDDC2-210ENST00000609574 LINC00869P0C866 280 aa10.93□□□□□ -0.66
HDDC2-210ENST00000609574 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
HDDC2-210ENST00000609574 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
HDDC2-210ENST00000609574 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
HDDC2-210ENST00000609574 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 CXCL2P19875 107 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 LINC00315P59091 139 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 LCN15Q6UWW0 184 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 SLC50A1Q9BRV3 221 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 ARL6Q9H0F7 186 aa10.92□□□□□ -0.66
HDDC2-210ENST00000609574 TRAV9-2A0A087WT02 112 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 H3BP45 60 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 SIVA1O15304 175 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 HOXA5P20719 270 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 AP3S2P59780 193 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 NFE4Q86UQ8 179 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 LINC00612Q8N6U2 182 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 LRTM2Q8N967 370 aa10.91□□□□□ -0.66
HDDC2-210ENST00000609574 PMS2P5A8MQ11 134 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 HOXB5P09067 269 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 LEPP41159 167 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 PLP1P60201 277 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 PXDC1Q5TGL8 231 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 NPVFQ9HCQ7 196 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
HDDC2-210ENST00000609574 FABP12A6NFH5 140 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 GOSR2O14653 212 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
HDDC2-210ENST00000609574 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 PYGO2Q9BRQ0 406 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 ARV1Q9H2C2 271 aa10.89□□□□□ -0.67
HDDC2-210ENST00000609574 J3KRW8 73 aa10.88□□□□□ -0.67
HDDC2-210ENST00000609574 Q5VSD8 79 aa10.88□□□□□ -0.67
HDDC2-210ENST00000609574 SLC25A21Q9BQT8 299 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-210ENST00000609574 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
HDDC2-210ENST00000609574 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-210ENST00000609574 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
HDDC2-210ENST00000609574 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 SFT2D2O95562 160 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-210ENST00000609574 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-210ENST00000609574 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 ZBTB8BQ8NAP8 495 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-210ENST00000609574 ZNF680Q8NEM1 530 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 OR10P1Q8NGE3 313 aa10.87□□□□□ -0.67
HDDC2-210ENST00000609574 A0A096LPF7 62 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 Q6ZTI0 123 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 TOMM5Q8N4H5 51 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 CCDC59Q9P031 241 aaKnown RBP10.86□□□□□ -0.67
HDDC2-210ENST00000609574 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
HDDC2-210ENST00000609574 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 PAX4O43316 350 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 NXPH4O95158 308 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 SNRPCP09234 159 aaKnown RBP10.85□□□□□ -0.67
HDDC2-210ENST00000609574 POLR2GP62487 172 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDDC2-210ENST00000609574 SLAQ13239 276 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 SPCS2Q15005 226 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
HDDC2-210ENST00000609574 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
HDDC2-210ENST00000609574 K7EPK0 472 aa10.84□□□□□ -0.67
HDDC2-210ENST00000609574 SSSCA1O60232 199 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms