RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 H3BRN7 92 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 ZNF701M0R085 212 aaPredicted RBP10.96□□□□□ -0.65
HDDC2-203ENST00000608284 PITX3O75364 302 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 GAGE7O76087 117 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 CXCL3P19876 107 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
HDDC2-203ENST00000608284 SELENOTP62341 195 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 TMED4Q7Z7H5 227 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 RNASE8Q8TDE3 154 aaKnown RBP10.96□□□□□ -0.65
HDDC2-203ENST00000608284 FRZBQ92765 325 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 RPUSD4Q96CM3 377 aaKnown RBP10.96□□□□□ -0.65
HDDC2-203ENST00000608284 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
HDDC2-203ENST00000608284 HERC1Q15751 4861 aa10.95□□□□□ -0.66
HDDC2-203ENST00000608284 CTDSP2O14595 271 aa10.95□□□□□ -0.66
HDDC2-203ENST00000608284 IFNA5P01569 189 aa10.95□□□□□ -0.66
HDDC2-203ENST00000608284 VAMP1P23763 118 aa10.95□□□□□ -0.66
HDDC2-203ENST00000608284 CTF1Q16619 201 aa10.95□□□□□ -0.66
HDDC2-203ENST00000608284 A0A087X0K7 114 aa10.94□□□□□ -0.66
HDDC2-203ENST00000608284 TMEM128Q5BJH2 165 aa10.94□□□□□ -0.66
HDDC2-203ENST00000608284 TMEM182Q6ZP80 229 aaPredicted RBP10.94□□□□□ -0.66
HDDC2-203ENST00000608284 KRTAP1-5Q9BYS1 174 aa10.94□□□□□ -0.66
HDDC2-203ENST00000608284 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
HDDC2-203ENST00000608284 LINC00869P0C866 280 aa10.93□□□□□ -0.66
HDDC2-203ENST00000608284 ERVFC1-1P60608 527 aa10.93□□□□□ -0.66
HDDC2-203ENST00000608284 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
HDDC2-203ENST00000608284 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
HDDC2-203ENST00000608284 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 CXCL2P19875 107 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 LINC00315P59091 139 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 LCN15Q6UWW0 184 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 SLC50A1Q9BRV3 221 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 ARL6Q9H0F7 186 aa10.92□□□□□ -0.66
HDDC2-203ENST00000608284 TRAV9-2A0A087WT02 112 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 H3BP45 60 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 SIVA1O15304 175 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 HOXA5P20719 270 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 AP3S2P59780 193 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 NFE4Q86UQ8 179 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 LINC00612Q8N6U2 182 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 LRTM2Q8N967 370 aa10.91□□□□□ -0.66
HDDC2-203ENST00000608284 PMS2P5A8MQ11 134 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 HOXB5P09067 269 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 LEPP41159 167 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 PLP1P60201 277 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 PXDC1Q5TGL8 231 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 NPVFQ9HCQ7 196 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
HDDC2-203ENST00000608284 FABP12A6NFH5 140 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 GOSR2O14653 212 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
HDDC2-203ENST00000608284 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 BPIFA4PQ86YQ2 179 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 PYGO2Q9BRQ0 406 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 ARV1Q9H2C2 271 aa10.89□□□□□ -0.67
HDDC2-203ENST00000608284 J3KRW8 73 aa10.88□□□□□ -0.67
HDDC2-203ENST00000608284 Q5VSD8 79 aa10.88□□□□□ -0.67
HDDC2-203ENST00000608284 SLC25A21Q9BQT8 299 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-203ENST00000608284 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
HDDC2-203ENST00000608284 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-203ENST00000608284 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
HDDC2-203ENST00000608284 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 SFT2D2O95562 160 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-203ENST00000608284 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-203ENST00000608284 TEPPQ6URK8 271 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 ZBTB8BQ8NAP8 495 aaPredicted RBP10.87□□□□□ -0.67
HDDC2-203ENST00000608284 ZNF680Q8NEM1 530 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 OR10P1Q8NGE3 313 aa10.87□□□□□ -0.67
HDDC2-203ENST00000608284 A0A096LPF7 62 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 Q6ZTI0 123 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 TOMM5Q8N4H5 51 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 CCDC59Q9P031 241 aaKnown RBP10.86□□□□□ -0.67
HDDC2-203ENST00000608284 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
HDDC2-203ENST00000608284 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 PAX4O43316 350 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 NXPH4O95158 308 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 SNRPCP09234 159 aaKnown RBP10.85□□□□□ -0.67
HDDC2-203ENST00000608284 POLR2GP62487 172 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDDC2-203ENST00000608284 SLAQ13239 276 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 SPCS2Q15005 226 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
HDDC2-203ENST00000608284 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
HDDC2-203ENST00000608284 K7EPK0 472 aa10.84□□□□□ -0.67
HDDC2-203ENST00000608284 SSSCA1O60232 199 aa10.84□□□□□ -0.67
HDDC2-203ENST00000608284 XGP55808 180 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms