RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PLP1P60201 277 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 THYN1Q9P016 225 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 P01737 135 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 FOXA3P55318 350 aaPredicted RBP12.4□□□□□ -0.42
CTSA-214ENST00000606788 LINC00310P59036 64 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 YPEL3P61236 119 aaPredicted RBP12.4□□□□□ -0.42
CTSA-214ENST00000606788 TMEM18Q96B42 140 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
CTSA-214ENST00000606788 IGKV3-7A0A075B6H7 116 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 M0QZ24 198 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 H3BUX3 64 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 NTF3P20783 257 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 TBL2Q9Y4P3 447 aaKnown RBP12.39□□□□□ -0.43
CTSA-214ENST00000606788 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 ZNF253O75346 499 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 APOHP02749 345 aaPredicted RBP12.39□□□□□ -0.43
CTSA-214ENST00000606788 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 Q86TA4 180 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 PRDM13Q9H4Q3 707 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
CTSA-214ENST00000606788 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
CTSA-214ENST00000606788 MTORP42345 2549 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 BLCAPP62952 87 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 EBI3Q14213 229 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 BMPR1BO00238 502 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 IGLC2P0DOY2 106 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 TMEM95Q3KNT9 176 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 GTSF1Q8WW33 167 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
CTSA-214ENST00000606788 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 IGLV2-11P01706 119 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 APCSP02743 223 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 TOMM20LQ6UXN7 152 aa12.37□□□□□ -0.43
CTSA-214ENST00000606788 SRSF8Q9BRL6 282 aaKnown RBP12.37□□□□□ -0.43
CTSA-214ENST00000606788 ZNF469Q96JG9 3925 aaPredicted RBP12.36□□□□□ -0.43
CTSA-214ENST00000606788 WI2-2373I1.2A0A1W2PRP0 233 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
CTSA-214ENST00000606788 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
CTSA-214ENST00000606788 KRTAP10-9P60411 292 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 LTAP01374 205 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 PAX8Q06710 450 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 PIFOQ8TCI5 191 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 FMC1Q96HJ9 113 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 CCDC140Q96MF4 163 aa12.36□□□□□ -0.43
CTSA-214ENST00000606788 RPP21Q9H633 154 aaKnown RBP12.36□□□□□ -0.43
CTSA-214ENST00000606788 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 PAX1P15863 534 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
CTSA-214ENST00000606788 MLST8Q9BVC4 326 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 RABAC1Q9UI14 185 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 HIST2H2BCQ6DN03 193 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 MBD6Q96DN6 1003 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
CTSA-214ENST00000606788 NF1P21359 2839 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 APCP25054 2843 aa12.35□□□□□ -0.43
CTSA-214ENST00000606788 ERCC8Q13216 396 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 GNB1LQ9BYB4 327 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 NOTCH3Q9UM47 2321 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 TRAV30A0A087WSZ9 112 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 J3KRW8 73 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 MRPS12O15235 138 aaKnown RBP12.34□□□□□ -0.43
CTSA-214ENST00000606788 TRGV3P03979 118 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 KRTDAPP60985 99 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
CTSA-214ENST00000606788 PMCHL1Q16048 86 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 TMEM75Q8N9X5 138 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 VGLL1Q99990 258 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 SMAD5-AS1Q9Y6J3 95 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 AMTP48728 403 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 DEFB1P60022 68 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 Q6ZWC4 215 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 FAM110DQ8TAY7 271 aaPredicted RBP12.34□□□□□ -0.43
CTSA-214ENST00000606788 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 TMEM14CQ9P0S9 112 aa12.34□□□□□ -0.43
CTSA-214ENST00000606788 MSMBP08118 114 aa12.33□□□□□ -0.44
CTSA-214ENST00000606788 ZNF502Q8TBZ5 544 aa12.33□□□□□ -0.44
CTSA-214ENST00000606788 DUX5Q96PT3 197 aa12.33□□□□□ -0.44
CTSA-214ENST00000606788 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
CTSA-214ENST00000606788 WNK1Q9H4A3 2382 aa12.33□□□□□ -0.44
CTSA-214ENST00000606788 DIRC3C9JPN6 131 aa12.33□□□□□ -0.44
CTSA-214ENST00000606788 PRAC2D3DTV9 90 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms