RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CD59P13987 128 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 C11orf53Q8IXP5 236 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 E9PLD3 99 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 LYZL6O75951 148 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 TSPAN13O95857 204 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 CD69Q07108 199 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 ABHD17BQ5VST6 288 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 HCP5Q6MZN7 132 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 Q6ZUT4 128 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 Q9H3A6 140 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 LOC107984156A0A0G2JMH3 177 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 SCGB2A1O75556 95 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 EVI2AP22794 236 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 ARL17AQ8IVW1 177 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 CACNG8Q8WXS5 425 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 KLRC4-KLRK1H3BQV0 150 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
CIRBP-228ENST00000590347 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 OR5AN1Q8NGI8 311 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 FOXI1Q12951 378 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
CIRBP-228ENST00000590347 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 SIVA1O15304 175 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 TCRAP04437 139 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 PLGLB1Q02325 96 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 CEND1Q8N111 149 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 TM2D2Q9BX73 214 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 C1QTNF4Q9BXJ3 329 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-228ENST00000590347 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 H3BVH4 76 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 NPYP01303 97 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 FOXC2Q99958 501 aa12.1□□□□□ -0.47
CIRBP-228ENST00000590347 PRDX2P32119 198 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 SPRNQ5BIV9 151 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 PIEZO2Q9H5I5 2752 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 BRI3O95415 125 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 HBDP02042 147 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-228ENST00000590347 PSMB2P49721 201 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 TNRC6BQ9UPQ9 1833 aaKnown RBP12.09□□□□□ -0.47
CIRBP-228ENST00000590347 ZNF785A8K8V0 405 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 SMCPP49901 116 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-228ENST00000590347 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
CIRBP-228ENST00000590347 ERG28Q9UKR5 140 aa12.09□□□□□ -0.47
CIRBP-228ENST00000590347 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.08□□□□□ -0.48
CIRBP-228ENST00000590347 A0A1B0GW15 77 aa12.08□□□□□ -0.48
CIRBP-228ENST00000590347 HAX1O00165 279 aa12.08□□□□□ -0.48
CIRBP-228ENST00000590347 GATA1P15976 413 aaPredicted RBP12.08□□□□□ -0.48
CIRBP-228ENST00000590347 ZFP2Q6ZN57 461 aa12.08□□□□□ -0.48
CIRBP-228ENST00000590347 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.48
CIRBP-228ENST00000590347 LOXL3P58215 753 aa12.08□□□□□ -0.48
CIRBP-228ENST00000590347 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
CIRBP-228ENST00000590347 MRPL32Q9BYC8 188 aaKnown RBP12.08□□□□□ -0.48
CIRBP-228ENST00000590347 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
CIRBP-228ENST00000590347 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 WI2-2373I1.2A0A1W2PRP0 233 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 CCDC179H3BU77 68 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 ZNF562Q6V9R5 426 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 DLL1O00548 723 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 Q86TA4 180 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 AKAP13Q12802 2813 aa12.07□□□□□ -0.48
CIRBP-228ENST00000590347 A6NJY4 79 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 M0R3E3 92 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 RIGQ13278 110 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 OVOL3O00110 214 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 CKS2P33552 79 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 CALYQ9NYX4 217 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 SVEP1Q4LDE5 3571 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 DNPH1O43598 174 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 NDUFA3O95167 84 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 RBP4P02753 201 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 MYCNOSP40205 109 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 LEPP41159 167 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CIRBP-228ENST00000590347 DEFB127Q9H1M4 99 aa12.06□□□□□ -0.48
CIRBP-228ENST00000590347 UPK2O00526 184 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms