RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 SSX8Q7RTT4 187 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 TMEM86AQ8N2M4 240 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OR52R1Q8NGF1 315 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OR4D11Q8NGI4 311 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OR9Q1Q8NGQ5 310 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OR5C1Q8NGR4 320 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OR13C4Q8NGS5 318 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 MBD3L1Q8WWY6 194 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 ACOT12Q8WYK0 555 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 H1FXQ92522 213 aaKnown RBP1.35□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BAQ96A08 127 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 ADAT3Q96EY9 351 aaPredicted RBP1.35□□□□□ -2.19
DHX40-209ENST00000583439 CAPZA3Q96KX2 299 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 PFDN5Q99471 154 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 CGREF1Q99674 301 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 UPK3BQ9BT76 320 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 TMEM70Q9BUB7 260 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 CCDC32Q9BV29 185 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 C16orf95Q9H693 158 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 SPANXA1Q9NS26 97 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 ASF1BQ9NVP2 202 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 SPENQ96T58 3664 aaKnown RBP1.35□□□□□ -2.19
DHX40-209ENST00000583439 ACACAQ13085 2346 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 CSMD1Q96PZ7 3565 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 NAV3Q8IVL0 2385 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 OTOGQ6ZRI0 2925 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 DOPEY2Q9Y3R5 2298 aa1.35□□□□□ -2.19
DHX40-209ENST00000583439 APC2O95996 2303 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 THADAQ6YHU6 1953 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DOCK4Q8N1I0 1966 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 USP9YO00507 2555 aaPredicted RBP1.34□□□□□ -2.19
DHX40-209ENST00000583439 PATJQ8NI35 1801 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 MICAL3Q7RTP6 2002 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 SPG11Q96JI7 2443 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 TRBV24-1A0A075B6N3 115 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 LOC102725191A0A1B0GVB3 256 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 ARL5CA6NH57 179 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 BUB1B-PAK6H3BSN5 160 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 H7BYZ3 331 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DEGS1O15121 323 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 ZNF73O43830 326 aaPredicted RBP1.34□□□□□ -2.19
DHX40-209ENST00000583439 APOA2P02652 100 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 PRB1P04280 392 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 BPGMP07738 259 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BOP23527 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 ATP6V0CP27449 155 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BBP33778 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 GABRA2P47869 451 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BDP58876 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BCP62807 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 RPS28P62857 69 aaKnown RBP1.34□□□□□ -2.19
DHX40-209ENST00000583439 HTR4Q13639 388 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST2H2BEQ16778 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 SCGB2B2Q4G0G5 96 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DEFB134Q4QY38 66 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.34□□□□□ -2.19
DHX40-209ENST00000583439 AADACL3Q5VUY0 350 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 FKBP1CQ5VVH2 108 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 RASL11AQ6T310 242 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HRCT1Q6UXD1 115 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 LCA10Q71F78 164 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 KTN1-AS1Q86SY8 53 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 NUP35Q8NFH5 326 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 FNDC9Q8TBE3 224 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DCANP1Q8TF63 244 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BHQ93079 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 TVP23CQ96ET8 276 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 ZC2HC1AQ96GY0 325 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 C2orf50Q96LR7 162 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 GPX7Q96SL4 187 aaPredicted RBP1.34□□□□□ -2.19
DHX40-209ENST00000583439 TSC22D3Q99576 134 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BNQ99877 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 HIST1H2BMQ99879 126 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DOHHQ9BU89 302 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 DERL1Q9BUN8 251 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 TTTY13Q9BZ97 58 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 IL36BQ9NZH7 164 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 PCTPQ9UKL6 214 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 FUT9Q9Y231 359 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 NUBP2Q9Y5Y2 271 aa1.34□□□□□ -2.19
DHX40-209ENST00000583439 CELSR2Q9HCU4 2923 aa1.34□□□□□ -2.2
DHX40-209ENST00000583439 MTORP42345 2549 aa1.34□□□□□ -2.2
DHX40-209ENST00000583439 MYH11P35749 1972 aa1.34□□□□□ -2.2
DHX40-209ENST00000583439 ASXL3Q9C0F0 2248 aa1.34□□□□□ -2.2
DHX40-209ENST00000583439 PCNX1Q96RV3 2341 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 NIPBLQ6KC79 2804 aaeCLIP1.33□□□□□ -2.2
DHX40-209ENST00000583439 TRAV36DV7A0A075B6V5 113 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 TRAV38-1A0A0B4J264 116 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 A0A0D9SEW6 157 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 A0A1B0GV90 55 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 MDFIC2A0A1B0GVS7 189 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 A0A1B0GW54 56 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 A0A1B0GX51 115 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 DUXBA0A1W2PPF3 345 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 ZNF860A6NHJ4 632 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 RFPL4AA6NLU0 287 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 LINC00587B1AMM8 73 aa1.33□□□□□ -2.2
DHX40-209ENST00000583439 RFPL4AL1F8VTS6 287 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms