RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
RFFL-208ENST00000581039 AKR1C1Q04828 323 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 RPUSD4Q96CM3 377 aaKnown RBP6.82□□□□□ -1.32
RFFL-208ENST00000581039 CIB3Q96Q77 187 aaPredicted RBP6.82□□□□□ -1.32
RFFL-208ENST00000581039 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 SCP2D1Q9UJQ7 156 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 HIGD1AQ9Y241 93 aa6.82□□□□□ -1.32
RFFL-208ENST00000581039 H3BRN7 92 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 J3QL48 77 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 PITX3O75364 302 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 IL5P05113 134 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 PRB4P10163 310 aaPredicted RBP6.81□□□□□ -1.32
RFFL-208ENST00000581039 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 ICAM4Q14773 271 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 C18orf15Q96N68 181 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 MDFICQ9P1T7 246 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
RFFL-208ENST00000581039 A0A087X0K7 114 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 A0A096LPF7 62 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 DUXBA0A1W2PPF3 345 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 PRSS46E5RG02 174 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 WRBO00258 174 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 RGS5O15539 181 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 SYNGR2O43760 224 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 OR5G3P0C626 314 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 ANXA7P20073 488 aaKnown RBP6.8□□□□□ -1.32
RFFL-208ENST00000581039 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 SPANXN5Q5MJ07 72 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 CYP2G1PQ6ZSU1 146 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 SMIM4Q8WVI0 70 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 VSIG2Q96IQ7 327 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 RNF24Q9Y225 148 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 TNFRSF18Q9Y5U5 241 aa6.8□□□□□ -1.32
RFFL-208ENST00000581039 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 TRAV9-2A0A087WT02 112 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 A0A087WTM6 91 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 SMCO3A2RU48 225 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 NXPH4O95158 308 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 SLC25A6P12236 298 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 DAZ2Q13117 558 aaKnown RBP6.79□□□□□ -1.32
RFFL-208ENST00000581039 GFI1BQ5VTD9 330 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 Q6ZTI0 123 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 ACOT7LQ6ZUV0 252 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 TMED4Q7Z7H5 227 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 CCDC190Q86UF4 302 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 PARD6GQ9BYG4 376 aaPredicted RBP6.79□□□□□ -1.32
RFFL-208ENST00000581039 MIXL1Q9H2W2 232 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 MCUBQ9NWR8 336 aa6.79□□□□□ -1.32
RFFL-208ENST00000581039 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 PMS2P5A8MQ11 134 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 J3KRW8 73 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 CTDSP2O14595 271 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 CTDSPLO15194 276 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 LINC00869P0C866 280 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 DNAH10OSP0CZ25 163 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 GCSHP23434 173 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 PLP1P60201 277 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 SELENOTP62341 195 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 IL18Q14116 193 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 CTF1Q16619 201 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 RABL2AQ9UBK7 228 aaPredicted RBP6.78□□□□□ -1.32
RFFL-208ENST00000581039 RABL2BQ9UNT1 228 aa6.78□□□□□ -1.32
RFFL-208ENST00000581039 STRAPQ9Y3F4 350 aaKnown RBP6.78□□□□□ -1.32
RFFL-208ENST00000581039 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 H3BP45 60 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 CXCL2P19875 107 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 LEPP41159 167 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 TMEM128Q5BJH2 165 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 LCN15Q6UWW0 184 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 Q6ZSN1 163 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 DIRAS2Q96HU8 199 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 PYGO2Q9BRQ0 406 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 SLC50A1Q9BRV3 221 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 NAA50Q9GZZ1 169 aaKnown RBP6.77□□□□□ -1.33
RFFL-208ENST00000581039 ARL6Q9H0F7 186 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 ZNF331Q9NQX6 463 aaPredicted RBP6.77□□□□□ -1.33
RFFL-208ENST00000581039 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
RFFL-208ENST00000581039 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 PRAC2D3DTV9 90 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 PAX4O43316 350 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 ZNF324O75467 553 aaPredicted RBP6.76□□□□□ -1.33
RFFL-208ENST00000581039 SNRPCP09234 159 aaKnown RBP6.76□□□□□ -1.33
RFFL-208ENST00000581039 VAMP1P23763 118 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 LRTM2Q8N967 370 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 ARV1Q9H2C2 271 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 GSN-AS1Q9NRJ2 163 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 FUT9Q9Y231 359 aa6.76□□□□□ -1.33
RFFL-208ENST00000581039 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
RFFL-208ENST00000581039 HOXB5P09067 269 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 LINC00305Q7Z4B0 112 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 BPIFA4PQ86YQ2 179 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 ZBTB8BQ8NAP8 495 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms