RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 A0A087WTM6 91 aa13.04□□□□□ -0.32
NDEL1-209ENST00000580738 FAM229AH3BQW9 127 aa13.04□□□□□ -0.32
NDEL1-209ENST00000580738 PITX3O75364 302 aa13.04□□□□□ -0.32
NDEL1-209ENST00000580738 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
NDEL1-209ENST00000580738 CCDC28AQ8IWP9 274 aa13.04□□□□□ -0.32
NDEL1-209ENST00000580738 S100A7P31151 101 aa13.03□□□□□ -0.32
NDEL1-209ENST00000580738 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
NDEL1-209ENST00000580738 GFI1BQ5VTD9 330 aa13.03□□□□□ -0.32
NDEL1-209ENST00000580738 Q6ZTI0 123 aa13.03□□□□□ -0.32
NDEL1-209ENST00000580738 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
NDEL1-209ENST00000580738 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
NDEL1-209ENST00000580738 SNURFLB1AK76 121 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 NXPH4O95158 308 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 AKAIN1P0CW23 69 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 AKR1C1Q04828 323 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 Q6ZSN1 163 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 TMED4Q7Z7H5 227 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 AP3S1Q92572 193 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 PRRT1Q99946 306 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 C20orf144Q9BQM9 153 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 HIGD1AQ9Y241 93 aa13.02□□□□□ -0.33
NDEL1-209ENST00000580738 A0A087WXM4 84 aa13.01□□□□□ -0.33
NDEL1-209ENST00000580738 A0A087X0K7 114 aa13.01□□□□□ -0.33
NDEL1-209ENST00000580738 RAP2BP61225 183 aa13.01□□□□□ -0.33
NDEL1-209ENST00000580738 CLVS1Q8IUQ0 354 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-209ENST00000580738 GCSHP23434 173 aa13□□□□□ -0.33
NDEL1-209ENST00000580738 SMIM4Q8WVI0 70 aa13□□□□□ -0.33
NDEL1-209ENST00000580738 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 J3KRW8 73 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 WRBO00258 174 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 HYPMO75409 117 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 IL5P05113 134 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
NDEL1-209ENST00000580738 OR5G3P0C626 314 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 DAZ2Q13117 558 aaKnown RBP12.99□□□□□ -0.33
NDEL1-209ENST00000580738 CYP2G1PQ6ZSU1 146 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 ACOT7LQ6ZUV0 252 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
NDEL1-209ENST00000580738 NAA50Q9GZZ1 169 aaKnown RBP12.99□□□□□ -0.33
NDEL1-209ENST00000580738 PMS2P5A8MQ11 134 aa12.98□□□□□ -0.33
NDEL1-209ENST00000580738 MRPS12O15235 138 aaKnown RBP12.98□□□□□ -0.33
NDEL1-209ENST00000580738 ANXA3P12429 323 aa12.98□□□□□ -0.33
NDEL1-209ENST00000580738 SRPXP78539 464 aa12.98□□□□□ -0.33
NDEL1-209ENST00000580738 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
NDEL1-209ENST00000580738 SPANXN5Q5MJ07 72 aa12.98□□□□□ -0.33
NDEL1-209ENST00000580738 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
NDEL1-209ENST00000580738 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
NDEL1-209ENST00000580738 TRAV12-3A0A0B4J271 114 aa12.97□□□□□ -0.33
NDEL1-209ENST00000580738 H3BP45 60 aa12.97□□□□□ -0.33
NDEL1-209ENST00000580738 SYNGR2O43760 224 aa12.97□□□□□ -0.33
NDEL1-209ENST00000580738 LINC00869P0C866 280 aa12.97□□□□□ -0.33
NDEL1-209ENST00000580738 RPP30P78346 268 aaKnown RBP12.97□□□□□ -0.33
NDEL1-209ENST00000580738 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-209ENST00000580738 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
NDEL1-209ENST00000580738 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 CTDSP2O14595 271 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 MED6O75586 246 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 PLP1P60201 277 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 CTF1Q16619 201 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 PATE2Q6UY27 113 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 SCGB3A2Q96PL1 93 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 GSN-AS1Q9NRJ2 163 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 SCP2D1Q9UJQ7 156 aa12.96□□□□□ -0.33
NDEL1-209ENST00000580738 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
NDEL1-209ENST00000580738 ANKRD20A5PA0PJZ0 165 aa12.95□□□□□ -0.34
NDEL1-209ENST00000580738 RGS5O15539 181 aa12.95□□□□□ -0.34
NDEL1-209ENST00000580738 ANXA7P20073 488 aaKnown RBP12.95□□□□□ -0.34
NDEL1-209ENST00000580738 ICOSQ9Y6W8 199 aa12.95□□□□□ -0.34
NDEL1-209ENST00000580738 DUXBA0A1W2PPF3 345 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 H3BTX0 84 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 PAX4O43316 350 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 CT45A10P0DMU9 189 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 SLC25A6P12236 298 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-209ENST00000580738 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
NDEL1-209ENST00000580738 ARL6Q9H0F7 186 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 MCUBQ9NWR8 336 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
NDEL1-209ENST00000580738 STRAPQ9Y3F4 350 aaKnown RBP12.94□□□□□ -0.34
NDEL1-209ENST00000580738 HMCN2Q8NDA2 5059 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 SLC17A3O00476 420 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
NDEL1-209ENST00000580738 LCN15Q6UWW0 184 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
NDEL1-209ENST00000580738 CTDSPLO15194 276 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 CXCL2P19875 107 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 IL18Q14116 193 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 ARV1Q9H2C2 271 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
NDEL1-209ENST00000580738 TRAV9-2A0A087WT02 112 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 SELENOTP62341 195 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 TEPPQ6URK8 271 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 LRTM2Q8N967 370 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms