RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
ITGB4-206ENST00000579662 VGLL1Q99990 258 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 LINC01619G3V211 115 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 SLC25A20O43772 301 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 HSD52Q0P140 79 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 SLX1AQ9BQ83 275 aa12.22□□□□□ -0.45
ITGB4-206ENST00000579662 LINC00587B1AMM8 73 aa12.21□□□□□ -0.45
ITGB4-206ENST00000579662 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
ITGB4-206ENST00000579662 FAM231BA6NCW3 169 aa12.21□□□□□ -0.45
ITGB4-206ENST00000579662 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.45
ITGB4-206ENST00000579662 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 PAX9P55771 341 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 TMEM86BQ8N661 226 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 Q96MF0 132 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 CT83Q5H943 113 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 DUX4L9Q6RFH8 374 aaPredicted RBP12.21□□□□□ -0.46
ITGB4-206ENST00000579662 TEX43Q6ZNM6 134 aa12.21□□□□□ -0.46
ITGB4-206ENST00000579662 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.46
ITGB4-206ENST00000579662 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
ITGB4-206ENST00000579662 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
ITGB4-206ENST00000579662 IGFL4Q6B9Z1 124 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 CNOT1A5YKK6 2376 aaKnown RBP12.2□□□□□ -0.46
ITGB4-206ENST00000579662 A0A087WX48 190 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 TMEM238C9JI98 176 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 SELENOKQ9Y6D0 94 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 IGKV1-39P01597 117 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 IGKV1D-39P04432 117 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 PI4KAP42356 2102 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 OR5A1Q8NGJ0 315 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
ITGB4-206ENST00000579662 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 H3BUT2 72 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 NDUFA4O00483 81 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 DKK1O94907 266 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 Q8NFD4 153 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 J3QKU1 62 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 TSPAN13O95857 204 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 PRB4P10163 310 aaPredicted RBP12.19□□□□□ -0.46
ITGB4-206ENST00000579662 TMEM249Q2WGJ8 235 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
ITGB4-206ENST00000579662 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 TRBV19A0A075B6N1 114 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 MST1LQ2TV78 715 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 C14orf178Q8N769 122 aaPredicted RBP12.19□□□□□ -0.46
ITGB4-206ENST00000579662 CSTL1Q9H114 145 aa12.19□□□□□ -0.46
ITGB4-206ENST00000579662 ESPL1Q14674 2120 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 FXYD7P58549 80 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 ERCC8Q13216 396 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 RASL10AQ92737 203 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 LIME1Q9H400 295 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 POU2AF1Q16633 256 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 MED12Q93074 2177 aa12.18□□□□□ -0.46
ITGB4-206ENST00000579662 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
ITGB4-206ENST00000579662 SPOCK3Q9BQ16 436 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 H3BRN7 92 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
ITGB4-206ENST00000579662 DEFB131AP59861 70 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
ITGB4-206ENST00000579662 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 PAX2Q02962 417 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 GVINP1Q7Z2Y8 2422 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 H3BUA1 57 aa12.17□□□□□ -0.46
ITGB4-206ENST00000579662 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.16□□□□□ -0.46
ITGB4-206ENST00000579662 CR1LQ2VPA4 569 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 CEP250Q9BV73 2442 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 RHODO00212 210 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 CKS1BP61024 79 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
ITGB4-206ENST00000579662 TCF15Q12870 199 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 THAP8Q8NA92 274 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 NCOR1O75376 2440 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 G3V318 75 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 ZNF134P52741 427 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 KRTAP27-1Q3LI81 207 aa12.16□□□□□ -0.46
ITGB4-206ENST00000579662 PRSS46E5RG02 174 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 TYMSP04818 313 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 UBE2DNLQ8IWF7 75 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 UBE2E2Q96LR5 201 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 LINC00158P58513 81 aa12.15□□□□□ -0.46
ITGB4-206ENST00000579662 AMN1Q8IY45 258 aa12.15□□□□□ -0.47
ITGB4-206ENST00000579662 TMEM158Q8WZ71 300 aa12.15□□□□□ -0.47
ITGB4-206ENST00000579662 C3orf56Q8N813 242 aa12.14□□□□□ -0.47
ITGB4-206ENST00000579662 SNRNP200O75643 2136 aaKnown RBP12.14□□□□□ -0.47
ITGB4-206ENST00000579662 IGHV3-53P01767 116 aa12.14□□□□□ -0.47
ITGB4-206ENST00000579662 IGHV2-5P01817 119 aa12.14□□□□□ -0.47
ITGB4-206ENST00000579662 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
ITGB4-206ENST00000579662 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
ITGB4-206ENST00000579662 TMEM256Q8N2U0 113 aa12.13□□□□□ -0.47
ITGB4-206ENST00000579662 TP53BP1Q12888 1972 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms