RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ZMAT5Q9UDW3 170 aaKnown RBP7.28□□□□□ -1.24
CDK5RAP3-208ENST00000578525 RP1L1Q8IWN7 2480 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-208ENST00000578525 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 A0A087X0K7 114 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 LOC102724200A0A096LPH7 203 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 A0A1B0GUT8 65 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 M0R2Z0 102 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 EREGO14944 169 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RAB4AP20338 218 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 GPR183P32249 361 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CRIP1P50238 77 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RAB9AP51151 201 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RHOGP84095 191 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PAX8Q06710 450 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CYB5R2Q6BCY4 276 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 COX8CQ7Z4L0 72 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C5orf56Q8N8D9 126 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 EEF1AKMT3Q96AZ1 226 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CHCHD1Q96BP2 118 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C8orf49Q96NF6 230 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PIMREGQ9BSJ6 248 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TMUB1Q9BVT8 246 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SMAD5-AS1Q9Y6J3 95 aa7.27□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ARHGAP32A7KAX9 2087 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PTPRZ1P23471 2315 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 A0A1B0GV90 55 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TMEM189A5PLL7 270 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TMEM8BA6NDV4 472 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 FAM181BA6NEQ2 426 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 M0R143 59 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SH2D1AO60880 128 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHV1-69P01742 117 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C15orf32Q32M92 178 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TDRG1Q3Y452 100 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PIP4P2Q8N4L2 257 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ASCL2Q99929 193 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 NDFIP1Q9BT67 221 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 MOB4Q9Y3A3 225 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 MGAQ8IWI9 3026 aa7.26□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SPENQ96T58 3664 aaKnown RBP7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TRBV7-1A0A0A6YYK4 115 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 NDUFS8O00217 210 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ARMS2P0C7Q2 107 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CTRLP40313 264 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CRIP2P52943 208 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RPS20P60866 119 aaKnown RBP7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RELQ04864 619 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PMCHL1Q16048 86 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C10orf105Q8TEF2 133 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ATP6V0BQ99437 205 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PRRC2CQ9Y520 2896 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHV4-61A0A0C4DH41 118 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 G3V318 75 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 M0QZK8 103 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CLEC3BP05452 202 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 BTF3P20290 206 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ATP5G2Q06055 141 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SPATA45Q537H7 98 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C19orf54Q5BKX5 351 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PRR31Q5SQ13 230 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 EBLN2Q6P2I7 272 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CLEC19AQ6UXS0 136 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PRR25Q96S07 402 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 CCL19Q99731 98 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SLC50A1Q9BRV3 221 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 SNHG12Q9BXW3 62 aa7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ANKHD1Q8IWZ3 2542 aaKnown RBP7.24□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHV3OR16-10A0A075B7F0 116 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TRAV41A0A0B4J266 112 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 RBAKDNA6NC62 111 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 C2orf70A6NJV1 201 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 FAM223BA6NKX1 122 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 LINC01548A6NM66 108 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 BUB3O43684 328 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHG4P01861 327 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 PRB4P10163 310 aaPredicted RBP7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 BMI1P35226 326 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 LCN12Q6JVE5 192 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 FAM223AQ8IWN6 122 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 MEGF9Q9H1U4 602 aa7.23□□□□□ -1.25
CDK5RAP3-208ENST00000578525 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
CDK5RAP3-208ENST00000578525 IGHV1-24A0A0C4DH33 117 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms