RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 HEATR1Q9H583 2144 aaKnown RBP5.56□□□□□ -1.52
KRT39-203ENST00000578078 A0A087WX48 190 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 TRAV24A0A0B4J272 114 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 A0A1B0GWB2 263 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 EVI2AP22794 236 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 MPV17P39210 176 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 VDAC2P45880 294 aaPredicted RBP5.56□□□□□ -1.52
KRT39-203ENST00000578078 ETDBQ3ZM63 59 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 WDR86Q86TI4 376 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 FAM57AQ8TBR7 257 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 PTH2Q96A98 100 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 SIRPDQ9H106 197 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 ERRFI1Q9UJM3 462 aaPredicted RBP5.56□□□□□ -1.52
KRT39-203ENST00000578078 RIF1Q5UIP0 2472 aaKnown RBP5.56□□□□□ -1.52
KRT39-203ENST00000578078 LOC400499M0QZD8 3231 aa5.56□□□□□ -1.52
KRT39-203ENST00000578078 CFAP47Q6ZTR5 3102 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 IGHV1-18A0A0C4DH31 117 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 IGLL5B9A064 214 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 RRHO14718 337 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 ZG16O60844 167 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 OR2H2O95918 312 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 MGST1P10620 155 aaKnown RBP5.55□□□□□ -1.52
KRT39-203ENST00000578078 SPINK2P20155 84 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 UQCRFS1P47985 274 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 FOXA3P55318 350 aaPredicted RBP5.55□□□□□ -1.52
KRT39-203ENST00000578078 EDDM3BP56851 147 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 WFDC2Q14508 124 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 MRPL23Q16540 153 aaKnown RBP5.55□□□□□ -1.52
KRT39-203ENST00000578078 SMIM20Q8N5G0 67 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 SYT8Q8NBV8 401 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 RITA1Q96K30 269 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 MGST2Q99735 147 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 CITED1Q99966 193 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 FAM215AQ9Y5M1 114 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 INSIG2Q9Y5U4 225 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 SLC25A15Q9Y619 301 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 ZFHX4Q86UP3 3567 aa5.55□□□□□ -1.52
KRT39-203ENST00000578078 SVILO95425 2214 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 GVINP1Q7Z2Y8 2422 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 TCRBV4S1A1TA0A5B7 111 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 HIGD1CA8MV81 97 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 PRRG2O14669 202 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 FCN3O75636 299 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 CSN3P07498 182 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 EIF4EBP1Q13541 118 aaPredicted RBP5.54□□□□□ -1.52
KRT39-203ENST00000578078 ALKBH6Q3KRA9 238 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
KRT39-203ENST00000578078 GDF5OSQ5U4N7 250 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 CFAP126Q5VTH2 177 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 IL1F10Q8WWZ1 152 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 NRGNQ92686 78 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 RND1Q92730 232 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 RPEQ96AT9 228 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 SLC25A2Q9BXI2 301 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 PRSS22Q9GZN4 317 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 TPSG1Q9NRR2 321 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 CEP250Q9BV73 2442 aa5.54□□□□□ -1.52
KRT39-203ENST00000578078 TRAV25A0A0B4J276 109 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 TMEM30CPA0ZSE6 113 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 K7EM74 188 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 M0R1B8 84 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 MGST3O14880 152 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 CNIH1O95406 144 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 XGP55808 180 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 FXYD3Q14802 87 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 ZNF497Q6ZNH5 498 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 TEN1Q86WV5 123 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 CEND1Q8N111 149 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 DRAM1Q8N682 238 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 HSD17B10Q99714 261 aaKnown RBP5.53□□□□□ -1.52
KRT39-203ENST00000578078 FZR1Q9UM11 496 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 IGHV3-64DA0A0J9YX35 117 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 FBLL1A6NHQ2 334 aaKnown RBP5.53□□□□□ -1.52
KRT39-203ENST00000578078 SPINK4O60575 86 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 NDUFS7O75251 213 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 IZUMO4Q1ZYL8 232 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 TMEM78Q5T7P6 136 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 SBSPONQ8IVN8 264 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 ARPC1AQ92747 370 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 RAB37Q96AX2 223 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
KRT39-203ENST00000578078 PLEKHA3Q9HB20 300 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 KLF12Q9Y4X4 402 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 HILPDAQ9Y5L2 63 aa5.53□□□□□ -1.52
KRT39-203ENST00000578078 ASPMQ8IZT6 3477 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 TRBV20-1A0A075B6N2 111 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 A0A0U1RRA0 63 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 SRRM4A7MD48 611 aaKnown RBP5.52□□□□□ -1.53
KRT39-203ENST00000578078 GGTLC3B5MD39 225 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 K7ENP7 123 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 MT-ATP8P03928 68 aa5.52□□□□□ -1.53
KRT39-203ENST00000578078 NHLRC4P0CG21 123 aaPredicted RBP5.52□□□□□ -1.53
KRT39-203ENST00000578078 IFITM1P13164 125 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms