RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SYNGR2O43760 224 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 HYPMO75409 117 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 IL5P05113 134 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 LINC00315P59091 139 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 TMEM182Q6ZP80 229 aaPredicted RBP8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 ACOT7LQ6ZUV0 252 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 FRZBQ92765 325 aa8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 NAA50Q9GZZ1 169 aaKnown RBP8.04□□□□□ -1.12
CTDNEP1-212ENST00000576613 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 SMCO3A2RU48 225 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 WRBO00258 174 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 CTDSP2O14595 271 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 GAGE7O76087 117 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 OR5G3P0C626 314 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 LINC00869P0C866 280 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 HOXA5P20719 270 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 SELENOTP62341 195 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 TMEM128Q5BJH2 165 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 SPANXN5Q5MJ07 72 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 CYP2G1PQ6ZSU1 146 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 TMED4Q7Z7H5 227 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 LYPD1Q8N2G4 141 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 DIRAS2Q96HU8 199 aa8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
CTDNEP1-212ENST00000576613 H3BP45 60 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 CXCL2P19875 107 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 ANXA7P20073 488 aaKnown RBP8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 VAMP1P23763 118 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 Q5VSD8 79 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 LRTM2Q8N967 370 aa8.02□□□□□ -1.13
CTDNEP1-212ENST00000576613 PMS2P5A8MQ11 134 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 SIVA1O15304 175 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 IFNA5P01569 189 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 FAUP35544 74 aaKnown RBP8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 PLP1P60201 277 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 GFI1BQ5VTD9 330 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 Q6ZRN7 208 aaPredicted RBP8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 CCDC190Q86UF4 302 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 SLC50A1Q9BRV3 221 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 TMPRSS5Q9H3S3 457 aa8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 RSL24D1Q9UHA3 163 aaKnown RBP8.01□□□□□ -1.13
CTDNEP1-212ENST00000576613 A0A096LPF7 62 aa8□□□□□ -1.13
CTDNEP1-212ENST00000576613 ARL6Q9H0F7 186 aa8□□□□□ -1.13
CTDNEP1-212ENST00000576613 TRGV2A0A075B6R0 118 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 PRB4P10163 310 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 XGP55808 180 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 KIR3DS1Q14943 382 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 NFE4Q86UQ8 179 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 PYGO2Q9BRQ0 406 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 ZNF331Q9NQX6 463 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-212ENST00000576613 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 HOXB5P09067 269 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 LEPP41159 167 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 PXDC1Q5TGL8 231 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 Q6ZTI0 123 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 BPIFA4PQ86YQ2 179 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 PARD6GQ9BYG4 376 aaPredicted RBP7.98□□□□□ -1.13
CTDNEP1-212ENST00000576613 TRAV12-3A0A0B4J271 114 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 J3KRW8 73 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 K7EPK0 472 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 MRPS12O15235 138 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 NXPH4O95158 308 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 FUSP35637 526 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 AP3S2P59780 193 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 RRAS2P62070 204 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 ICAM4Q14773 271 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 SPCS2Q15005 226 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 PATE2Q6UY27 113 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 LINC00305Q7Z4B0 112 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 ZNF680Q8NEM1 530 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 C18orf15Q96N68 181 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 ODF3Q96PU9 254 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 SLC25A21Q9BQT8 299 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 PSENENQ9NZ42 101 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 CCDC59Q9P031 241 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 MGAT4CQ9UBM8 478 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 PXMP4Q9Y6I8 212 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 ICOSQ9Y6W8 199 aa7.97□□□□□ -1.13
CTDNEP1-212ENST00000576613 TRAV9-2A0A087WT02 112 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 FABP12A6NFH5 140 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 PRAC2D3DTV9 90 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 FNDC10F2Z333 226 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 GOSR2O14653 212 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 SSSCA1O60232 199 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 SFT2D2O95562 160 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms