RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DCDP81605 110 aaKnown RBP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 RPL36AP83881 106 aaKnown RBP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 IL17AQ16552 155 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 HIGD2BQ4VC39 106 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 DPPA3Q6W0C5 159 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 Q6ZS92 163 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 LINC00467Q9BRT7 94 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF355PQ9NSJ1 428 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 OR5V1Q9UGF6 321 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 ICOSQ9Y6W8 199 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 COL18A1P39060 1754 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 LYRM1O43325 122 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 CREBL2O60519 120 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF14P17017 642 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 CD24P25063 80 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 MPV17P39210 176 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 NANOS3P60323 173 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 Q0VG73 95 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 GFI1BQ5VTD9 330 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 LINC00299Q6ZSB3 139 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 DYNAPQ8N1N2 210 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 CCL4L1Q8NHW4 92 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 LSM10Q969L4 123 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 GAPVD1Q14C86 1478 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 FRMPD1Q5SYB0 1578 aa3.38□□□□□ -1.87
TOPBP1-210ENST00000572787 TET2Q6N021 2002 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 RIC1Q4ADV7 1423 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 SCAPERQ9BY12 1400 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 OBSL1O75147 1896 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 CCDC88BA6NC98 1476 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 IGLV3-9A0A075B6K5 115 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 C19orf71A6NCJ1 209 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 TIMM17BO60830 172 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 EDF1O60869 148 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 COX6A1P12074 109 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 XCL1P47992 114 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 PEA15Q15121 130 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 SS18Q15532 418 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 MIC13Q5XKP0 118 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 RPRMLQ8N4K4 120 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 LINC00052Q96N35 136 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 S100A13Q99584 98 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 TPRKBQ9Y3C4 175 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 U3KQK5 164 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 TP53BP1Q12888 1972 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 RBBP6Q7Z6E9 1792 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 SIPA1L1O43166 1804 aa3.37□□□□□ -1.87
TOPBP1-210ENST00000572787 MYH7BA7E2Y1 1941 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNFX1Q9P2E3 1918 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 SPHKAPQ2M3C7 1700 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 POLA1P09884 1462 aaPredicted RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 NUP98P52948 1817 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 IGHV3-15A0A0B4J1V0 119 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 C11orf94C9JXX5 98 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 H3BQ15 152 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 SSSCA1O60232 199 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF737O75373 536 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 NDUFB6O95139 128 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 MT-ATP8P03928 68 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 CKS2P33552 79 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 NOVP48745 357 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 SUPT4H1P63272 117 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 FOXF1Q12946 379 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ATP11AUNQ6ZP68 121 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF720Q7Z2F6 126 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ATP6V0E2Q8NHE4 81 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 MUC7Q8TAX7 377 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 CLEC2BQ92478 149 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 CHCHD1Q96BP2 118 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 IMMP2LQ96T52 175 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 LINC00574Q9H8X3 128 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 TNFRSF19Q9NS68 423 aa3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 THOC2Q8NI27 1593 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 ARHGEF28Q8N1W1 1705 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-210ENST00000572787 MYH9P35579 1960 aaKnown RBP3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 SMARCA4P51532 1647 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 A0A0B4J2C4 111 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 A0A1W2PQD3 144 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 SNCGO76070 127 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 LHBP01229 141 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 HMGA2P52926 109 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 C12orf73Q69YU5 71 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 Q6ZQT7 251 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 OR2T35Q8NGX2 323 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 C10orf82Q8WW14 230 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 HYLS1Q96M11 299 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 NPVFQ9HCQ7 196 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 PIKFYVEQ9Y2I7 2098 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 PXDNLA1KZ92 1463 aa3.35□□□□□ -1.87
TOPBP1-210ENST00000572787 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms