RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 IL5P05113 134 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 HTN1P15515 57 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 GATA2P23769 480 aaPredicted RBP10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 FAUP35544 74 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 PLP1P60201 277 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 OR5I1Q13606 314 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 PSG3Q16557 428 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 CCDC28AQ8IWP9 274 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 LINC00612Q8N6U2 182 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 LRRC20Q8TCA0 184 aa10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 MRPS16Q9Y3D3 137 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 APOBP04114 4563 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-215ENST00000568676 HYPMO75409 117 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 CXCL2P19875 107 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 TNFSF8P32971 234 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 KRTAP10-2P60368 255 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 SPANXN5Q5MJ07 72 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 TMEM182Q6ZP80 229 aaPredicted RBP10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 STRAPQ9Y3F4 350 aaKnown RBP10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 DNAH5Q8TE73 4624 aa10.92□□□□□ -0.66
HERPUD1-215ENST00000568676 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
HERPUD1-215ENST00000568676 WRBO00258 174 aa10.91□□□□□ -0.66
HERPUD1-215ENST00000568676 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
HERPUD1-215ENST00000568676 RLN2P04090 185 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 LINC00869P0C866 280 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 VAMP1P23763 118 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 AP3S2P59780 193 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 LCN15Q6UWW0 184 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 TMED4Q7Z7H5 227 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 RPUSD4Q96CM3 377 aaKnown RBP10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.66
HERPUD1-215ENST00000568676 SNURFLB1AK76 121 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 OR5G3P0C626 314 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 ESRGQ1W209 222 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 C4orf46Q504U0 113 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 PXDC1Q5TGL8 231 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 DEDD2Q8WXF8 326 aa10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 SLC25A21Q9BQT8 299 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-215ENST00000568676 SMCO3A2RU48 225 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 FNDC10F2Z333 226 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 K7EPK0 472 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 EREGO14944 169 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 SPANXN2Q5MJ10 180 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 CDPF1Q6NVV7 123 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 CCDC190Q86UF4 302 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 UHRF2Q96PU4 802 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 SOSTQ9BQB4 213 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 ZNF586Q9NXT0 402 aa10.88□□□□□ -0.67
HERPUD1-215ENST00000568676 A0A0J9YY99 117 aa10.87□□□□□ -0.67
HERPUD1-215ENST00000568676 ANXA7P20073 488 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-215ENST00000568676 PYDC2Q56P42 97 aa10.87□□□□□ -0.67
HERPUD1-215ENST00000568676 NPVFQ9HCQ7 196 aa10.87□□□□□ -0.67
HERPUD1-215ENST00000568676 ZNF331Q9NQX6 463 aaPredicted RBP10.87□□□□□ -0.67
HERPUD1-215ENST00000568676 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 PMS2P5A8MQ11 134 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 H3BP45 60 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 GAGE7O76087 117 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 SFT2D2O95562 160 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 HOXA5P20719 270 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 DLK1P80370 383 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 ID3Q02535 119 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
HERPUD1-215ENST00000568676 MRPS12O15235 138 aaKnown RBP10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 HOXB5P09067 269 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 INAFM2P0DMQ5 153 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 LINC00315P59091 139 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 GFI1BQ5VTD9 330 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 BPIFA4PQ86YQ2 179 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 PYGO2Q9BRQ0 406 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 ARL6Q9H0F7 186 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
HERPUD1-215ENST00000568676 SIVA1O15304 175 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 ERVFC1-1P60608 527 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 UBE2MP61081 183 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 PPP1R1AQ13522 171 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 ZNF546Q86UE3 836 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 TOMM5Q8N4H5 51 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 PXMP4Q9Y6I8 212 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 V9GYH0 126 aa10.84□□□□□ -0.67
HERPUD1-215ENST00000568676 HERC1Q15751 4861 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 LEPP41159 167 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 PATE2Q6UY27 113 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 ZNF680Q8NEM1 530 aa10.83□□□□□ -0.68
HERPUD1-215ENST00000568676 OR10P1Q8NGE3 313 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms