RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 AKAIN1P0CW23 69 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 RAP2BP61225 183 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 AKR1C1Q04828 323 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 PSG3Q16557 428 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 Q6ZSN1 163 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 NFE4Q86UQ8 179 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 TMPRSS5Q9H3S3 457 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 MDFICQ9P1T7 246 aa8.08□□□□□ -1.12
GTF3C1-209ENST00000568569 A0A087WTM6 91 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 A0A087WXM4 84 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 PRSS46E5RG02 174 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 PITX3O75364 302 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 ANXA3P12429 323 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 OR51S1Q8NGJ8 323 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 SMIM4Q8WVI0 70 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 RPUSD4Q96CM3 377 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 VSIG2Q96IQ7 327 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 CIB3Q96Q77 187 aaPredicted RBP8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 HIGD1AQ9Y241 93 aa8.07□□□□□ -1.12
GTF3C1-209ENST00000568569 MED6O75586 246 aa8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 NXPH4O95158 308 aa8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 DAZ2Q13117 558 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 GFI1BQ5VTD9 330 aa8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 CLVS1Q8IUQ0 354 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-209ENST00000568569 DUXBA0A1W2PPF3 345 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 HYPMO75409 117 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 IL5P05113 134 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 PRB4P10163 310 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 CXCL2P19875 107 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 GCSHP23434 173 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 CYP2G1PQ6ZSU1 146 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 Q6ZTI0 123 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 ACOT7LQ6ZUV0 252 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 TMED4Q7Z7H5 227 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 SCP2D1Q9UJQ7 156 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
GTF3C1-209ENST00000568569 TRGV2A0A075B6R0 118 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 WRBO00258 174 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 OR5G3P0C626 314 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 LINC00869P0C866 280 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 SMIM18P0DKX4 95 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 SLC25A6P12236 298 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 PLP1P60201 277 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 LCN15Q6UWW0 184 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 CCDC190Q86UF4 302 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 PYGO2Q9BRQ0 406 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 PARD6GQ9BYG4 376 aaPredicted RBP8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 RNF24Q9Y225 148 aa8.04□□□□□ -1.12
GTF3C1-209ENST00000568569 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 SMCO3A2RU48 225 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 PMS2P5A8MQ11 134 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 RGS5O15539 181 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 SYNGR2O43760 224 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 ANXA7P20073 488 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 SELENOTP62341 195 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 SPANXN5Q5MJ07 72 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 SLC50A1Q9BRV3 221 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 MIXL1Q9H2W2 232 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 ZNF331Q9NQX6 463 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 ICOSQ9Y6W8 199 aa8.03□□□□□ -1.12
GTF3C1-209ENST00000568569 ANKRD20A5PA0PJZ0 165 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 H3BP45 60 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 CTDSPLO15194 276 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 MRPS12O15235 138 aaKnown RBP8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 HAMPP81172 84 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 ODF3Q96PU9 254 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 TMEM70Q9BUB7 260 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 MCUBQ9NWR8 336 aa8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 STRAPQ9Y3F4 350 aaKnown RBP8.02□□□□□ -1.13
GTF3C1-209ENST00000568569 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 J3KRW8 73 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 K7EP13 123 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 PAX4O43316 350 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 ZNF324O75467 553 aaPredicted RBP8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 LEPP41159 167 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 IL18Q14116 193 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 CTF1Q16619 201 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 LRTM2Q8N967 370 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 ZNF680Q8NEM1 530 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 LINC00467Q9BRT7 94 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 ARL6Q9H0F7 186 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 ARV1Q9H2C2 271 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 FUT9Q9Y231 359 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 LY96Q9Y6Y9 160 aa8.01□□□□□ -1.13
GTF3C1-209ENST00000568569 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 PRAC2D3DTV9 90 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 TMEM128Q5BJH2 165 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 ZNF431Q8TF32 576 aaPredicted RBP8□□□□□ -1.13
GTF3C1-209ENST00000568569 NAA50Q9GZZ1 169 aaKnown RBP8□□□□□ -1.13
GTF3C1-209ENST00000568569 GSN-AS1Q9NRJ2 163 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 MSRB1Q9NZV6 116 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 RABL2AQ9UBK7 228 aaPredicted RBP8□□□□□ -1.13
GTF3C1-209ENST00000568569 RABL2BQ9UNT1 228 aa8□□□□□ -1.13
GTF3C1-209ENST00000568569 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms