RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 CBLN1P23435 193 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 TEX38Q6PEX7 206 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 SCRT1Q9BWW7 348 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 EBLN2Q6P2I7 272 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 PRSS57Q6UWY2 283 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 CBY1Q9Y3M2 126 aa9.6□□□□□ -0.87
TMEM170A-205ENST00000568559 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 M0R3E3 92 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 NDUFA3O95167 84 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 GZMBP10144 247 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 ATOH7Q8N100 152 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 HCFC1P51610 2035 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 PMS2P5A8MQ11 134 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 SLC25A39Q9BZJ4 359 aaPredicted RBP9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 TRAV1-1A0A0B4J248 108 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 TTC9CQ8N5M4 171 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 OR10J6PQ8NGY7 276 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 Q8TAT8 98 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 ZNF586Q9NXT0 402 aa9.59□□□□□ -0.87
TMEM170A-205ENST00000568559 ZZEF1O43149 2961 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 ZNF25P17030 456 aaPredicted RBP9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 REC114Q7Z4M0 266 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 COL12A1Q99715 3063 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 TEX22C9J3V5 150 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 C9JQL5 133 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 PSG9Q00887 426 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 LDLRAD2Q5SZI1 272 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 SPSB3Q6PJ21 355 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
TMEM170A-205ENST00000568559 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 B4DEV8 164 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 GFI1BQ5VTD9 330 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 C20orf202A1L168 122 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 ID1P41134 155 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 Q9H3A6 140 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 VWC2LB2RUY7 222 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 TOMM40O96008 361 aa9.57□□□□□ -0.88
TMEM170A-205ENST00000568559 IGLC1P0CG04 106 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 SRSF1Q07955 248 aaKnown RBP eCLIP9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 CD5P06127 495 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 TCF24Q7RTU0 167 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 ELOVL1Q9BW60 279 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 M0R2Z0 102 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 GCGP01275 180 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 TMEM170AQ8WVE7 144 aa9.56□□□□□ -0.88
TMEM170A-205ENST00000568559 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 PAM16Q9Y3D7 125 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 LSM4Q9Y4Z0 139 aaKnown RBP9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 A0A1W2PRE2 83 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 AVPP01185 164 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 C18orf15Q96N68 181 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 PEX7O00628 323 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 PKIAP61925 76 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 MEGF9Q9H1U4 602 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 RNASE4P34096 147 aaKnown RBP9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 DEFB136Q30KP8 78 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
TMEM170A-205ENST00000568559 WDFY3Q8IZQ1 3526 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 LINC01548A6NM66 108 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 K7EIM0 57 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 YPEL3P61236 119 aaPredicted RBP9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 ZNF114Q8NC26 417 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PRR20EP86478 221 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PRR20CP86479 221 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PRR20DP86480 221 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PRR20BP86481 221 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PRR20AP86496 221 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 PSMG3-AS1Q96PY0 264 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 IGHV3-73A0A0B4J1V6 119 aa9.54□□□□□ -0.88
TMEM170A-205ENST00000568559 I3L2K1 104 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms