RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 NMUP48645 174 aa7.12□□□□□ -1.27
HDGFL3-206ENST00000568294 MEF2CQ06413 473 aaPredicted RBP7.12□□□□□ -1.27
HDGFL3-206ENST00000568294 CHRDL1Q9BU40 450 aa7.12□□□□□ -1.27
HDGFL3-206ENST00000568294 TMEM155Q4W5P6 130 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 SLC25A34Q6PIV7 304 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 PIP4P1Q86T03 277 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 IGKV3-7A0A075B6H7 116 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 D6R8Y8 96 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 FNDC10F2Z333 226 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 K7EMI3 77 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 SPRY2O43597 315 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 HLA-DRB1P01911 266 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 MC5RP33032 325 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 STXBP6Q8NFX7 210 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 C8orf46Q8TAG6 207 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 NPIPB5A8MRT5 1133 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 EVI2AP22794 236 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 ECSCRQ19T08 205 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 PSG8Q9UQ74 426 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 COX11Q9Y6N1 276 aa7.11□□□□□ -1.27
HDGFL3-206ENST00000568294 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 IGHV3OR16-10A0A075B7F0 116 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 TOMM40O96008 361 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 ORM1P02763 201 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 CD3EP07766 207 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 LGALS7P47929 136 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 LDLRAD2Q5SZI1 272 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 NGBQ9NPG2 151 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 CBY1Q9Y3M2 126 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 BUB1B-PAK6H3BSN5 160 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 FSTL3O95633 263 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 CACNG7P62955 275 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 TWIST1Q15672 202 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 FAM120AOSQ5T036 256 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 FAM231DQ6ZW35 169 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 BPIFA4PQ86YQ2 179 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 LINC00527Q9UJ94 153 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 CREBBPQ92793 2442 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 SPTBN4Q9H254 2564 aa7.1□□□□□ -1.27
HDGFL3-206ENST00000568294 LTAP01374 205 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 IGKV1-17P01599 117 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 LYZL1Q6UWQ5 148 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 THAP8Q8NA92 274 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 RNF125Q96EQ8 232 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 FBLL1A6NHQ2 334 aaKnown RBP7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 MRGPRG-AS1Q2M3A8 158 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 TRGV9Q99603 122 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 CUBNO60494 3623 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 A0A1B0GXF2 115 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 CLUHP3Q96NS8 147 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 SCNM1Q9BWG6 230 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 THYN1Q9P016 225 aa7.09□□□□□ -1.27
HDGFL3-206ENST00000568294 SHISA9B4DS77 424 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 K7EQM0 130 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 RELQ04864 619 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 ERCC8Q13216 396 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 RNF182Q8N6D2 247 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 AAMDCQ9H7C9 122 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 OTORQ9NRC9 128 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 TMEM189A5PLL7 270 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 CCL21O00585 134 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 LIPFP07098 398 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 CELSR1Q9NYQ6 3014 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 NDUFS7O75251 213 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 MYCNOSP40205 109 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 CSN1S1P47710 185 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 RIGQ13278 110 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 UBE2V1Q13404 147 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 OR4A5Q8NH83 315 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 AP1S3Q96PC3 154 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 MLST8Q9BVC4 326 aa7.08□□□□□ -1.28
HDGFL3-206ENST00000568294 CKS2P33552 79 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 WIPF2Q8TF74 440 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 GAS8-AS1O95177 125 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 GATA1P15976 413 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 GPR183P32249 361 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 CRIP1P50238 77 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 ATP5IP56385 69 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 GAGE1Q13065 139 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 KLF5Q13887 457 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 ATP5L2Q7Z4Y8 100 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 UFC1Q9Y3C8 167 aa7.07□□□□□ -1.28
HDGFL3-206ENST00000568294 TRBV19A0A075B6N1 114 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms