RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 EDDM3BP56851 147 aa8.2□□□□□ -1.1
UBFD1-205ENST00000566136 LCN12Q6JVE5 192 aa8.2□□□□□ -1.1
UBFD1-205ENST00000566136 RBMXL1Q96E39 390 aaKnown RBP8.2□□□□□ -1.1
UBFD1-205ENST00000566136 TMPRSS5Q9H3S3 457 aa8.2□□□□□ -1.1
UBFD1-205ENST00000566136 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
UBFD1-205ENST00000566136 DCHS2Q6V1P9 2916 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 HCFC1P51610 2035 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 FBN2P35556 2912 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 ZFP92A6NM28 416 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 E9PLD3 99 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
UBFD1-205ENST00000566136 MSMO1Q15800 293 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 FAM24BQ8N5W8 94 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 LEAP2Q969E1 77 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 MUCL1Q96DR8 90 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 METTL26Q96S19 204 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
UBFD1-205ENST00000566136 ZNF727A8MUV8 499 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 H3BQ15 152 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 RPL39P5Q59GN2 51 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 TCTEX1D4Q5JR98 221 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 ZNF506Q5JVG8 444 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
UBFD1-205ENST00000566136 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 SMIM26A0A096LP01 95 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 CEBPZOSA8MTT3 80 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 PROP1O75360 226 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 ATP5G1P05496 136 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 AMTP48728 403 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 FAM162BQ5T6X4 162 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 DPPA3Q6W0C5 159 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 TAF15Q92804 592 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBFD1-205ENST00000566136 HSPB8Q9UJY1 196 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 TACC2O95359 2948 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 M0R1X1 148 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 RPS23P62266 143 aaKnown RBP8.18□□□□□ -1.1
UBFD1-205ENST00000566136 RHEBQ15382 184 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 Q6YL49 198 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 ZNF429Q86V71 674 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 ZNF835Q9Y2P0 537 aa8.18□□□□□ -1.1
UBFD1-205ENST00000566136 IGLV5-45A0A087WSX0 123 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 SLC17A3O00476 420 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 IGKV1D-33P01593 117 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 IGKV1-33P01594 117 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 VDAC2P45880 294 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-205ENST00000566136 TFF3Q07654 80 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 MORN2Q502X0 79 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 TCF24Q7RTU0 167 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 ZNF439Q8NDP4 499 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 OR4S2Q8NH73 311 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 HSD17B10Q99714 261 aaKnown RBP8.17□□□□□ -1.1
UBFD1-205ENST00000566136 PSMG3Q9BT73 122 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-205ENST00000566136 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 MT-ND4LP03901 98 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 HSPB1P04792 205 aaKnown RBP8.17□□□□□ -1.1
UBFD1-205ENST00000566136 PRTN3P24158 256 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 EMP1P54849 157 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 RAB5BP61020 215 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 MEF2CQ06413 473 aaPredicted RBP8.17□□□□□ -1.1
UBFD1-205ENST00000566136 SMDT1Q9H4I9 107 aa8.17□□□□□ -1.1
UBFD1-205ENST00000566136 RAI1Q7Z5J4 1906 aaPredicted RBP8.16□□□□□ -1.1
UBFD1-205ENST00000566136 DEFA4P12838 97 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 FGF7P21781 194 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
UBFD1-205ENST00000566136 KHDC3LQ587J8 217 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 C1orf174Q8IYL3 243 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 SLC25A22Q9H936 323 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 YLPM1P49750 1951 aaKnown RBP8.16□□□□□ -1.1
UBFD1-205ENST00000566136 CSMD2Q7Z408 3487 aa8.16□□□□□ -1.1
UBFD1-205ENST00000566136 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 PMS2P5A8MQ11 134 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 BCL2P10415 239 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 RPP25LQ8N5L8 163 aaKnown RBP8.15□□□□□ -1.1
UBFD1-205ENST00000566136 OR9G1Q8NH87 305 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 FAM57AQ8TBR7 257 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 SFXN3Q9BWM7 321 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 POLQO75417 2590 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 TET2Q6N021 2002 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IGLV3-9A0A075B6K5 115 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IGHV4-61A0A0C4DH41 118 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 C19orf84I3L1E1 186 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 LHBP01229 141 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IFNA17P01571 189 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IGHV1-46P01743 117 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IGHV4-59P01825 116 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 SERF2P84101 59 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 TNFAIP6P98066 277 aaPredicted RBP8.15□□□□□ -1.1
UBFD1-205ENST00000566136 ATP5L2Q7Z4Y8 100 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 OR10P1Q8NGE3 313 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 MBD3L1Q8WWY6 194 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 IFI27L2Q9H2X8 130 aa8.15□□□□□ -1.1
UBFD1-205ENST00000566136 TUBA4BQ9H853 241 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms