RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CD24P25063 80 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 S100A7P31151 101 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 PDZD11Q5EBL8 140 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 ASPHD1Q5U4P2 390 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 OR8I2Q8N0Y5 310 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF491Q8N8L2 437 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 Q8N9W7 124 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 LINC00479Q96M42 142 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 TBX15Q96SF7 602 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 MLST8Q9BVC4 326 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 RNASE7Q9H1E1 156 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 Q9H3A6 140 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 GSN-AS1Q9NRJ2 163 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 LRBAP50851 2863 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 TRBV6-1A0A0K0K1D8 114 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 IZUMO1RA6ND01 250 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 H3BRN7 92 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 GATCO43716 136 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 GNG7O60262 68 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 AMBPP02760 352 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 TCRAP04437 139 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 JOSD1Q15040 202 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 LINC00482Q8N8I6 264 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 OR4F17Q8NGA8 305 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 MBD6Q96DN6 1003 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 GRAMD2BQ96HH9 432 aa5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 FAM103A1Q9BTL3 118 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-209ENST00000564678 IGHV7-81A0A0B4J1V7 117 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 PDE6HQ13956 83 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 OR5R1Q8NH85 324 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 SERTAD4Q9NUC0 356 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 C21orf62Q9NYP8 219 aa5.68□□□□□ -1.5
HERPUD1-209ENST00000564678 TRBV19A0A075B6N1 114 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 M0QZ24 198 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 LTAP01374 205 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 IGHV4-39P01824 125 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 HLA-DQA1P01909 254 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 IL4P05112 153 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 ESDP10768 282 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 EGR2P11161 476 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 CRISP2P16562 243 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 COL8A1P27658 744 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 NDPQ00604 133 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 PAX8Q06710 450 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 Q0VG73 95 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 FAM159AQ6UWV7 190 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 LRRC75A-AS1Q8N1F1 130 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 GBGT1Q8N5D6 347 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF492Q9P255 531 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 NAT8BQ9UHF3 227 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 NPFFO15130 113 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 IGLC2P0DOY2 106 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 CBLN1P23435 193 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 SAA4P35542 130 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 GNG5P63218 68 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 PAFAH1B2P68402 229 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 SLAQ13239 276 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 USF2Q15853 346 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 LEMD1Q68G75 181 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 PRSS22Q9GZN4 317 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 GEMIN7Q9H840 131 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF331Q9NQX6 463 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
HERPUD1-209ENST00000564678 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 A8MWL6 223 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 MRPS12O15235 138 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 NDUFB8O95169 186 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 SEC61GP60059 68 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 Q56UQ5 140 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 KLF17Q5JT82 389 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 TMEM136Q6ZRR5 245 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 FAM168AQ92567 244 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 ZFP30Q9Y2G7 519 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 ITPR1Q14643 2758 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 MED13LQ71F56 2210 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 C19orf71A6NCJ1 209 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 RAB9AP51151 201 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 OR10J3Q5JRS4 329 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 TMEM75Q8N9X5 138 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 OR4B1Q8NGF8 309 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 C10orf105Q8TEF2 133 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 ZNF414Q96IQ9 312 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 CCL19Q99731 98 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 GFRA4Q9GZZ7 299 aa5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 SOX21Q9Y651 276 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-209ENST00000564678 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 OR2J3O76001 311 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 CTSGP08311 255 aa5.65□□□□□ -1.5
HERPUD1-209ENST00000564678 SNRPCP09234 159 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms