RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 RNF24Q9Y225 148 aa12.27□□□□□ -0.45
SYNE2-211ENST00000553801 A0A087X0K7 114 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 TMEM128Q5BJH2 165 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 RPUSD4Q96CM3 377 aaKnown RBP12.26□□□□□ -0.45
SYNE2-211ENST00000553801 ZNF586Q9NXT0 402 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 RSL24D1Q9UHA3 163 aaKnown RBP12.26□□□□□ -0.45
SYNE2-211ENST00000553801 STRAPQ9Y3F4 350 aaKnown RBP12.26□□□□□ -0.45
SYNE2-211ENST00000553801 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-211ENST00000553801 HERC1Q15751 4861 aa12.26□□□□□ -0.45
SYNE2-211ENST00000553801 SMCO3A2RU48 225 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 RLN2P04090 185 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 OR5G3P0C626 314 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 PLP1P60201 277 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 SELENOTP62341 195 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 ACOT7LQ6ZUV0 252 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 PGPEP1Q9NXJ5 209 aa12.25□□□□□ -0.45
SYNE2-211ENST00000553801 SNURFLB1AK76 121 aa12.24□□□□□ -0.45
SYNE2-211ENST00000553801 EREGO14944 169 aa12.24□□□□□ -0.45
SYNE2-211ENST00000553801 VAMP1P23763 118 aa12.24□□□□□ -0.45
SYNE2-211ENST00000553801 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
SYNE2-211ENST00000553801 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 GAGE7O76087 117 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 LINC00869P0C866 280 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 HOXA5P20719 270 aa12.23□□□□□ -0.45
SYNE2-211ENST00000553801 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
SYNE2-211ENST00000553801 H3BP45 60 aa12.22□□□□□ -0.45
SYNE2-211ENST00000553801 CXCL2P19875 107 aa12.22□□□□□ -0.45
SYNE2-211ENST00000553801 ANXA7P20073 488 aaKnown RBP12.22□□□□□ -0.45
SYNE2-211ENST00000553801 LINC00315P59091 139 aa12.22□□□□□ -0.45
SYNE2-211ENST00000553801 LCN15Q6UWW0 184 aa12.21□□□□□ -0.45
SYNE2-211ENST00000553801 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
SYNE2-211ENST00000553801 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
SYNE2-211ENST00000553801 HOXB5P09067 269 aa12.2□□□□□ -0.46
SYNE2-211ENST00000553801 SPCS2Q15005 226 aa12.2□□□□□ -0.46
SYNE2-211ENST00000553801 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
SYNE2-211ENST00000553801 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
SYNE2-211ENST00000553801 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-211ENST00000553801 PMS2P5A8MQ11 134 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 SFT2D2O95562 160 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 PRB4P10163 310 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-211ENST00000553801 AP3S2P59780 193 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 KIR3DS1Q14943 382 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 GFI1BQ5VTD9 330 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-211ENST00000553801 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 FRZBQ92765 325 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-211ENST00000553801 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
SYNE2-211ENST00000553801 CCDC59Q9P031 241 aaKnown RBP12.19□□□□□ -0.46
SYNE2-211ENST00000553801 FABP12A6NFH5 140 aa12.18□□□□□ -0.46
SYNE2-211ENST00000553801 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
SYNE2-211ENST00000553801 SIVA1O15304 175 aa12.18□□□□□ -0.46
SYNE2-211ENST00000553801 SMIM18P0DKX4 95 aa12.18□□□□□ -0.46
SYNE2-211ENST00000553801 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
SYNE2-211ENST00000553801 TMPRSS5Q9H3S3 457 aa12.18□□□□□ -0.46
SYNE2-211ENST00000553801 A0A096LPF7 62 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 K7EPK0 472 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 ID3Q02535 119 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 PPP1R1AQ13522 171 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 SOSTQ9BQB4 213 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 PYGO2Q9BRQ0 406 aa12.17□□□□□ -0.46
SYNE2-211ENST00000553801 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-211ENST00000553801 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 IFNA5P01569 189 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 LEPP41159 167 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 XGP55808 180 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 RRAS2P62070 204 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-211ENST00000553801 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
SYNE2-211ENST00000553801 Q5VSD8 79 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 TEPPQ6URK8 271 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 Q6ZTI0 123 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 MGAT4CQ9UBM8 478 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 PXMP4Q9Y6I8 212 aa12.16□□□□□ -0.46
SYNE2-211ENST00000553801 TRAV12-3A0A0B4J271 114 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 GOSR2O14653 212 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 TNFSF8P32971 234 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 LINC00305Q7Z4B0 112 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 DYNC2LI1Q8TCX1 351 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 SMIM8Q96KF7 97 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 C18orf15Q96N68 181 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 ODF3Q96PU9 254 aa12.15□□□□□ -0.46
SYNE2-211ENST00000553801 PRAC2D3DTV9 90 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 J3KRW8 73 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms