RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 DNAJC15Q9Y5T4 150 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 SERP1Q9Y6X1 66 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 MYH13Q9UKX3 1938 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 KIF13AQ9H1H9 1805 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.42□□□□□ -2.02
TDP1-207ENST00000553617 TOPBP1Q92547 1522 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 RTEL1-TNFRSF6BF6WH68 1400 aa2.42□□□□□ -2.02
TDP1-207ENST00000553617 DSCAML1Q8TD84 2053 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TNRC6AQ8NDV7 1962 aaKnown RBP2.41□□□□□ -2.02
TDP1-207ENST00000553617 ERVK-7P63135 1459 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 MAGI2Q86UL8 1455 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TICRRQ7Z2Z1 1910 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 IGHV3OR15-7A0A075B7D8 119 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 IGKV1-9A0A0C4DH69 117 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 MUC21A0A0G2JKD1 596 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 MCRIP1C9JLW8 97 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 K7EP34 96 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 ZNF324O75467 553 aaPredicted RBP2.41□□□□□ -2.02
TDP1-207ENST00000553617 IGKV1-39P01597 117 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 IGLV3-25P01717 112 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 IGKV1D-39P04432 117 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 NMBP08949 121 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TRGC1P0CF51 173 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 ZNF286BP0CG31 522 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TPT1P13693 172 aaKnown RBP2.41□□□□□ -2.02
TDP1-207ENST00000553617 FABP4P15090 132 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TDRG1Q3Y452 100 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 TMEM155Q4W5P6 130 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 C10orf91Q5T1B1 145 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 ZFP2Q6ZN57 461 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 KRTAP11-1Q8IUC1 163 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 C10orf111Q8N326 155 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 YPEL2Q96QA6 119 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 NPCDR1Q9BY65 106 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 UQCR10Q9UDW1 63 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 LSM2Q9Y333 95 aaKnown RBP2.41□□□□□ -2.02
TDP1-207ENST00000553617 TPRKBQ9Y3C4 175 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 LRRIQ1Q96JM4 1722 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 RBBP6Q7Z6E9 1792 aaKnown RBP2.41□□□□□ -2.02
TDP1-207ENST00000553617 CTTNBP2Q8WZ74 1663 aa2.41□□□□□ -2.02
TDP1-207ENST00000553617 GLI3P10071 1580 aa2.4□□□□□ -2.02
TDP1-207ENST00000553617 CEP164Q9UPV0 1460 aa2.4□□□□□ -2.02
TDP1-207ENST00000553617 ABCA5Q8WWZ7 1642 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 TRGV5A0A0B4J1U4 118 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 IGKV1-6A0A0C4DH72 117 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 OR1I1O60431 355 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 NDUFB6O95139 128 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 CYB5AP00167 134 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 HBDP02042 147 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 RBP4P02753 201 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ZNF688P0C7X2 276 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 SLC25A4P12235 298 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 NOVP48745 357 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 Q0VG73 95 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 EBI3Q14213 229 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 TIFABQ6ZNK6 161 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 C7orf65Q6ZTY9 151 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 Q8N9L7 120 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 TSLPQ969D9 159 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 CYYR1Q96J86 154 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ZNF714Q96N38 554 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 HIST1H2BLQ99880 126 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 SHANK2-AS3Q9BTD1 123 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 SLC35B3Q9H1N7 401 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 BCL2L10Q9HD36 194 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ZNF835Q9Y2P0 537 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ABCC3O15438 1527 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 N4BP2Q86UW6 1770 aaPredicted RBP2.4□□□□□ -2.03
TDP1-207ENST00000553617 ZC3H13Q5T200 1668 aaKnown RBP2.4□□□□□ -2.03
TDP1-207ENST00000553617 ANAPC1Q9H1A4 1944 aa2.4□□□□□ -2.03
TDP1-207ENST00000553617 ARAP2Q8WZ64 1704 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 ABCA3Q99758 1704 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 CFTRP13569 1480 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 FYCO1Q9BQS8 1478 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 ARID1AO14497 2285 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 ARHGAP5Q13017 1502 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 LMTK2Q8IWU2 1503 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 KIF21AQ7Z4S6 1674 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.39□□□□□ -2.03
TDP1-207ENST00000553617 C7orf66A4D0T2 115 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 FAM24AA6NFZ4 105 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 F8W1H4 67 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 PITX3O75364 302 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 SNCGO76070 127 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 SOD1P00441 154 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 C1QAP02745 245 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 CISD3P0C7P0 127 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
TDP1-207ENST00000553617 SNCAP37840 140 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 LSM3P62310 102 aaKnown RBP2.39□□□□□ -2.03
TDP1-207ENST00000553617 FOXF1Q12946 379 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 TMEM256Q8N2U0 113 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 LINC00301Q8NCQ3 95 aa2.39□□□□□ -2.03
TDP1-207ENST00000553617 ATP6V0E2Q8NHE4 81 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms