RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 AKR1C1Q04828 323 aa11.58□□□□□ -0.56
CACNB3-222ENST00000552465 KIR3DS1Q14943 382 aa11.58□□□□□ -0.56
CACNB3-222ENST00000552465 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
CACNB3-222ENST00000552465 SCP2D1Q9UJQ7 156 aa11.58□□□□□ -0.56
CACNB3-222ENST00000552465 HIGD1AQ9Y241 93 aa11.58□□□□□ -0.56
CACNB3-222ENST00000552465 A0A096LPF7 62 aa11.57□□□□□ -0.56
CACNB3-222ENST00000552465 CTF1Q16619 201 aa11.57□□□□□ -0.56
CACNB3-222ENST00000552465 LRRC20Q8TCA0 184 aa11.57□□□□□ -0.56
CACNB3-222ENST00000552465 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
CACNB3-222ENST00000552465 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-222ENST00000552465 NAA50Q9GZZ1 169 aaKnown RBP11.57□□□□□ -0.56
CACNB3-222ENST00000552465 PIGBOS1A0A0B4J2F0 54 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 CTDSP2O14595 271 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 SIVA1O15304 175 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 HYPMO75409 117 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 IL5P05113 134 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 SLC25A6P12236 298 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 TMPRSS5Q9H3S3 457 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 MDFICQ9P1T7 246 aa11.56□□□□□ -0.56
CACNB3-222ENST00000552465 ANKRD20A5PA0PJZ0 165 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 WRBO00258 174 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 CTDSPLO15194 276 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 RGS5O15539 181 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 SYNGR2O43760 224 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 IFNA5P01569 189 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
CACNB3-222ENST00000552465 OR5G3P0C626 314 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 PLP1P60201 277 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 ACOT7LQ6ZUV0 252 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
CACNB3-222ENST00000552465 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 FAT1Q14517 4588 aa11.55□□□□□ -0.56
CACNB3-222ENST00000552465 DAZ2Q13117 558 aaKnown RBP11.54□□□□□ -0.56
CACNB3-222ENST00000552465 SPANXN5Q5MJ07 72 aa11.54□□□□□ -0.56
CACNB3-222ENST00000552465 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
CACNB3-222ENST00000552465 C18orf15Q96N68 181 aa11.54□□□□□ -0.56
CACNB3-222ENST00000552465 MCUBQ9NWR8 336 aa11.54□□□□□ -0.56
CACNB3-222ENST00000552465 A0A087WTM6 91 aa11.53□□□□□ -0.56
CACNB3-222ENST00000552465 MRPS12O15235 138 aaKnown RBP11.53□□□□□ -0.56
CACNB3-222ENST00000552465 LINC00869P0C866 280 aa11.53□□□□□ -0.56
CACNB3-222ENST00000552465 IL18Q14116 193 aa11.53□□□□□ -0.56
CACNB3-222ENST00000552465 ICAM4Q14773 271 aa11.53□□□□□ -0.56
CACNB3-222ENST00000552465 Q6ZTI0 123 aa11.53□□□□□ -0.56
CACNB3-222ENST00000552465 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
CACNB3-222ENST00000552465 SMCO3A2RU48 225 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 NXPH4O95158 308 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 ANXA7P20073 488 aaKnown RBP11.52□□□□□ -0.57
CACNB3-222ENST00000552465 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 NFE4Q86UQ8 179 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
CACNB3-222ENST00000552465 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
CACNB3-222ENST00000552465 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
CACNB3-222ENST00000552465 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 H3BP45 60 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 CXCL2P19875 107 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 SELENOTP62341 195 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 PATE2Q6UY27 113 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 S100A7AQ86SG5 101 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 DIRAS2Q96HU8 199 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 RABL2AQ9UBK7 228 aaPredicted RBP11.51□□□□□ -0.57
CACNB3-222ENST00000552465 RABL2BQ9UNT1 228 aa11.51□□□□□ -0.57
CACNB3-222ENST00000552465 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 TRAV12-3A0A0B4J271 114 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
CACNB3-222ENST00000552465 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 PYGO2Q9BRQ0 406 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 ARL6Q9H0F7 186 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
CACNB3-222ENST00000552465 MYCBP2O75592 4640 aa11.49□□□□□ -0.57
CACNB3-222ENST00000552465 J3KRW8 73 aa11.49□□□□□ -0.57
CACNB3-222ENST00000552465 GCSHP23434 173 aa11.49□□□□□ -0.57
CACNB3-222ENST00000552465 ARV1Q9H2C2 271 aa11.49□□□□□ -0.57
CACNB3-222ENST00000552465 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
CACNB3-222ENST00000552465 J3QL48 77 aa11.48□□□□□ -0.57
CACNB3-222ENST00000552465 CT45A10P0DMU9 189 aa11.48□□□□□ -0.57
CACNB3-222ENST00000552465 VAMP1P23763 118 aa11.48□□□□□ -0.57
CACNB3-222ENST00000552465 ZBTB8BQ8NAP8 495 aaPredicted RBP11.48□□□□□ -0.57
CACNB3-222ENST00000552465 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
CACNB3-222ENST00000552465 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
CACNB3-222ENST00000552465 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
CACNB3-222ENST00000552465 K7EPK0 472 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
CACNB3-222ENST00000552465 LEPP41159 167 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 Q6ZSN1 163 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 ODF3Q96PU9 254 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 RSL24D1Q9UHA3 163 aaKnown RBP11.47□□□□□ -0.57
CACNB3-222ENST00000552465 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
CACNB3-222ENST00000552465 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
CACNB3-222ENST00000552465 TRGV1A0A0A0MS02 117 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms