RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 VPREB3Q9UKI3 123 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 GOLGA4Q13439 2230 aaKnown RBP7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 IGKV1-12A0A0C4DH73 117 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 IGKV1D-12P01611 117 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 TMEM196Q5HYL7 178 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 ARID2Q68CP9 1835 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 CCL3P10147 92 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 Q6P435 159 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 KLF14Q8TD94 323 aaPredicted RBP7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 Q6ZRM9 215 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 RNF138Q8WVD3 245 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 IGF2BP2-AS1Q96M15 143 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 SHANK2-AS3Q9BTD1 123 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 METRNQ9UJH8 293 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 COL4A1P02462 1669 aa7.11□□□□□ -1.27
PPFIA2-220ENST00000550584 TMEM240Q5SV17 173 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 DTX1Q86Y01 620 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 SMCHD1A6NHR9 2005 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 ITGBL1O95965 494 aaPredicted RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 SERP2Q8N6R1 65 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 SSC4DQ8WTU2 575 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 CCL13Q99616 98 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 PDCD11Q14690 1871 aaKnown RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 LMO1P25800 156 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 PEAR1Q5VY43 1037 aaPredicted RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 CCL17Q92583 94 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 C1orf147Q96MC9 270 aaPredicted RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 A0A1W2PR77 199 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 LILRA6Q6PI73 481 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 SCN1AP35498 2009 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 K7EM74 188 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 RNASE2P10153 161 aaKnown RBP7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 FHL1Q13642 323 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 RHOHQ15669 191 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 Q6ZS52 159 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
PPFIA2-220ENST00000550584 PRR20EP86478 221 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PRR20CP86479 221 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PRR20DP86480 221 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PRR20BP86481 221 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PRR20AP86496 221 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 C9orf139Q6ZV77 190 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 IGKV3D-11A0A0A0MRZ8 115 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 LINC00158P58513 81 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 ZNF826PQ6ZT77 177 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 Q8N1Y9 231 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 THAP8Q8NA92 274 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 ORMDL1Q9P0S3 153 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 U3KQE9 123 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 CCDC179H3BU77 68 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 DAD1P61803 113 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 DEFB103AP81534 67 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 MLST8Q9BVC4 326 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 SCN2AQ99250 2005 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 PCM1Q15154 2024 aa7.09□□□□□ -1.27
PPFIA2-220ENST00000550584 MYO16Q9Y6X6 1858 aa7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 CRYGBP07316 175 aa7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 FOXF2Q12947 444 aa7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 ECSCRQ19T08 205 aa7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 PRORYQ9H606 182 aa7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 COL5A3P25940 1745 aaPredicted RBP7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 YLPM1P49750 1951 aaKnown RBP7.09□□□□□ -1.28
PPFIA2-220ENST00000550584 EVPLQ92817 2033 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 TMEM14BQ9NUH8 114 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 PKIGQ9Y2B9 76 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 PDE6GP18545 87 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 UBR3Q6ZT12 1888 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 SEC61GP60059 68 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 BADQ92934 168 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 SRXN1Q9BYN0 137 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 NDUFA12Q9UI09 145 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 SIGLEC9Q9Y336 463 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 LSM4Q9Y4Z0 139 aaKnown RBP7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 ARID1AO14497 2285 aa7.08□□□□□ -1.28
PPFIA2-220ENST00000550584 ITLN1Q8WWA0 313 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 SMKR1H3BMG3 65 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 LGALS9O00182 355 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 SPAARA0A1B0GVQ0 90 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 FXYD7P58549 80 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 PSG7Q13046 419 aa7.07□□□□□ -1.28
PPFIA2-220ENST00000550584 C16orf47Q6ZP98 133 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms