RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 CDKN1BP46527 198 aa11.88□□□□□ -0.51
HCFC2-205ENST00000550444 SPCS2Q15005 226 aa11.88□□□□□ -0.51
HCFC2-205ENST00000550444 RNASE8Q8TDE3 154 aaKnown RBP11.88□□□□□ -0.51
HCFC2-205ENST00000550444 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
HCFC2-205ENST00000550444 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 ADAP1O75689 374 aa11.87□□□□□ -0.51
HCFC2-205ENST00000550444 SLC25A6P12236 298 aa11.87□□□□□ -0.51
HCFC2-205ENST00000550444 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 HOXA5P20719 270 aa11.87□□□□□ -0.51
HCFC2-205ENST00000550444 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
HCFC2-205ENST00000550444 RPUSD4Q96CM3 377 aaKnown RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 RSL24D1Q9UHA3 163 aaKnown RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
HCFC2-205ENST00000550444 STRAPQ9Y3F4 350 aaKnown RBP11.87□□□□□ -0.51
HCFC2-205ENST00000550444 H7BYZ3 331 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 HOXB5P09067 269 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 SNRPCP09234 159 aaKnown RBP11.86□□□□□ -0.51
HCFC2-205ENST00000550444 LINC00869P0C866 280 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 ANXA7P20073 488 aaKnown RBP11.86□□□□□ -0.51
HCFC2-205ENST00000550444 KIR3DS1Q14943 382 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 UPK3BQ9BT76 320 aa11.86□□□□□ -0.51
HCFC2-205ENST00000550444 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
HCFC2-205ENST00000550444 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
HCFC2-205ENST00000550444 RLN2P04090 185 aa11.85□□□□□ -0.51
HCFC2-205ENST00000550444 SMIM18P0DKX4 95 aa11.85□□□□□ -0.51
HCFC2-205ENST00000550444 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
HCFC2-205ENST00000550444 LRTM2Q8N967 370 aa11.85□□□□□ -0.51
HCFC2-205ENST00000550444 MRPS16Q9Y3D3 137 aaKnown RBP11.85□□□□□ -0.51
HCFC2-205ENST00000550444 A0A087X0K7 114 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 J3KRW8 73 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 INAFM2P0DMQ5 153 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 CCDC190Q86UF4 302 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 ARL6Q9H0F7 186 aa11.84□□□□□ -0.51
HCFC2-205ENST00000550444 FABP12A6NFH5 140 aa11.83□□□□□ -0.52
HCFC2-205ENST00000550444 PMS2P5A8MQ11 134 aa11.83□□□□□ -0.52
HCFC2-205ENST00000550444 FAUP35544 74 aaKnown RBP11.83□□□□□ -0.52
HCFC2-205ENST00000550444 LINC00315P59091 139 aa11.83□□□□□ -0.52
HCFC2-205ENST00000550444 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
HCFC2-205ENST00000550444 S100A7AQ86SG5 101 aa11.83□□□□□ -0.52
HCFC2-205ENST00000550444 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
HCFC2-205ENST00000550444 SFT2D2O95562 160 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 PLP1P60201 277 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 SELENOTP62341 195 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
HCFC2-205ENST00000550444 GFI1BQ5VTD9 330 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 LINC00612Q8N6U2 182 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 C20orf144Q9BQM9 153 aa11.82□□□□□ -0.52
HCFC2-205ENST00000550444 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 PPP1R1AQ13522 171 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 ARV1Q9H2C2 271 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 TMPRSS5Q9H3S3 457 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 ZNF331Q9NQX6 463 aaPredicted RBP11.81□□□□□ -0.52
HCFC2-205ENST00000550444 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 PTTG2Q9NZH5 202 aa11.81□□□□□ -0.52
HCFC2-205ENST00000550444 CCDC59Q9P031 241 aaKnown RBP11.81□□□□□ -0.52
HCFC2-205ENST00000550444 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 H3BNG1 76 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 H3BTX0 84 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
HCFC2-205ENST00000550444 CCNKO75909 580 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 TNFSF8P32971 234 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 MCFD2Q8NI22 146 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 DYNC2LI1Q8TCX1 351 aa11.8□□□□□ -0.52
HCFC2-205ENST00000550444 EREGO14944 169 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 ID3Q02535 119 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 LCN15Q6UWW0 184 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 Q6ZTI0 123 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 LYPD1Q8N2G4 141 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 TOMM5Q8N4H5 51 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 SOSTQ9BQB4 213 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 SLC50A1Q9BRV3 221 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 NPVFQ9HCQ7 196 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
HCFC2-205ENST00000550444 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 A0A096LPF7 62 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 SSSCA1O60232 199 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 CXCL2P19875 107 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 AP3S2P59780 193 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 PYDC2Q56P42 97 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 Q6ZRN7 208 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-205ENST00000550444 LINC00305Q7Z4B0 112 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
HCFC2-205ENST00000550444 SLC25A21Q9BQT8 299 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-205ENST00000550444 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
HCFC2-205ENST00000550444 GOSR2O14653 212 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 SIVA1O15304 175 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 XGP55808 180 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 TEPPQ6URK8 271 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 TNFRSF18Q9Y5U5 241 aa11.77□□□□□ -0.53
HCFC2-205ENST00000550444 SLC17A3O00476 420 aa11.76□□□□□ -0.53
HCFC2-205ENST00000550444 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
HCFC2-205ENST00000550444 LEPP41159 167 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms