RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 LSM3P62310 102 aaKnown RBP1.23□□□□□ -2.21
CCDC38-208ENST00000549876 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 PATE2Q6UY27 113 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 LINC00305Q7Z4B0 112 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 ZNF418Q8TF45 676 aaPredicted RBP1.23□□□□□ -2.21
CCDC38-208ENST00000549876 ZNF714Q96N38 554 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 CACYBPQ9HB71 228 aaKnown RBP1.23□□□□□ -2.21
CCDC38-208ENST00000549876 HIGD1AQ9Y241 93 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 RNF11Q9Y3C5 154 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 NISCHQ9Y2I1 1504 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 MPDZO75970 2070 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 SOGA1O94964 1423 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 NCKAP5O14513 1909 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 RTL9Q8NET4 1388 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 STRCP1A6NGW2 1772 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 A0A096LPI6 279 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 TRAV13-1A0A0B4J241 112 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 ODAMA1E959 279 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 UBL3O95164 117 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 ASAH2BP0C7U1 165 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 MGST1P10620 155 aaKnown RBP1.22□□□□□ -2.21
CCDC38-208ENST00000549876 RPL22P35268 128 aaKnown RBP1.22□□□□□ -2.21
CCDC38-208ENST00000549876 C4orf22Q6V702 233 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 Q8IYB0 196 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 LINC00301Q8NCQ3 95 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OR4S1Q8NGB4 309 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OR4B1Q8NGF8 309 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OR5A2Q8NGI9 324 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OR51A4Q8NGJ6 313 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 LY96Q9Y6Y9 160 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OVOS2A0A0J9YW53 1432 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 OVOS2Q6IE36 1432 aa1.22□□□□□ -2.21
CCDC38-208ENST00000549876 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 ICE1Q9Y2F5 2266 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 TRAV3A0A0B4J244 114 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 TRAV12-1A0A0B4J245 112 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 C5orf58C9J3I9 102 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 C17orf112F2Z3M2 114 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 H3BMG7 143 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 J3QR89 54 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 K7EP13 123 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 M0R2Z0 102 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 LYRM1O43325 122 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 OR1I1O60431 355 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 PAEPP09466 180 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 ZNF705BP0CI00 300 aaPredicted RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 SSR2P43308 183 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 MRPS36P82909 103 aaKnown RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 KLRD1Q13241 179 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 PDE6HQ13956 83 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 RNASE10Q5GAN6 216 aaKnown RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 RPL13AP3Q6NVV1 102 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 RPS19BP1Q86WX3 136 aaKnown RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 MMGT1Q8N4V1 131 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 LINC00311Q8N616 119 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 OR5H6Q8NGV6 325 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 NAT14Q8WUY8 206 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 CGREF1Q99674 301 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 CBLN4Q9NTU7 201 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 SOX21Q9Y651 276 aaPredicted RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 KIAA1107Q9UPP5 1409 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 N4BP2Q86UW6 1770 aaPredicted RBP1.21□□□□□ -2.22
CCDC38-208ENST00000549876 NUMA1Q14980 2115 aa1.21□□□□□ -2.22
CCDC38-208ENST00000549876 MDC1Q14676 2089 aaKnown RBP1.2□□□□□ -2.22
CCDC38-208ENST00000549876 C2orf70A6NJV1 201 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 K7ERJ3 54 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 RER1O15258 196 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 NCR2O95944 276 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 CRPP02741 224 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 GPX1P07203 203 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 TSPAN19P0C672 248 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 RAB5CP51148 216 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 ROMO1P60602 79 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 DEFB103AP81534 67 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 Q5XG85 94 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 Q6ZRN7 208 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-208ENST00000549876 FP248Q71RG6 208 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-208ENST00000549876 COA5Q86WW8 74 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 FAM216BQ8N7L0 139 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 OR4K15Q8NH41 348 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 PRELID3AQ96N28 172 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 AP1S3Q96PC3 154 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 RETNLBQ9BQ08 111 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 VPS25Q9BRG1 176 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 OR5AC2Q9NZP5 309 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 CALML5Q9NZT1 146 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 U3KQ87 197 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 DISP2A7MBM2 1401 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 KDM6AO15550 1401 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-208ENST00000549876 VWDEQ8N2E2 1590 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 CACNA1GO43497 2377 aa1.2□□□□□ -2.22
CCDC38-208ENST00000549876 TCOF1Q13428 1488 aaKnown RBP1.19□□□□□ -2.22
CCDC38-208ENST00000549876 MYLKQ15746 1914 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 A0A1B0GW64 132 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 OR2T8A6NH00 312 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 UQCRQO14949 82 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 SMIM24O75264 130 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms