RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RP1P56715 2156 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 N4BP2Q86UW6 1770 aaPredicted RBP1.56□□□□□ -2.16
SNRPF-202ENST00000549580 SORL1Q92673 2214 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 ARHGEF11O15085 1522 aa1.56□□□□□ -2.16
SNRPF-202ENST00000549580 PIK3C2AO00443 1686 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 COL4A5P29400 1685 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 FBN1P35555 2871 aaKnown RBP1.55□□□□□ -2.16
SNRPF-202ENST00000549580 MYO5AQ9Y4I1 1855 aaKnown RBP1.55□□□□□ -2.16
SNRPF-202ENST00000549580 TRBV6-8A0A0A6YYG3 113 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 E7EUB6 86 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 MT-ND6P03923 174 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 RPS3P23396 243 aaKnown RBP eCLIP1.55□□□□□ -2.168e-8■□□□□ 8.6
SNRPF-202ENST00000549580 RPS28P62857 69 aaKnown RBP1.55□□□□□ -2.16
SNRPF-202ENST00000549580 C1orf134Q5TEV5 83 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.55□□□□□ -2.16
SNRPF-202ENST00000549580 LINC00305Q7Z4B0 112 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 FAM216BQ8N7L0 139 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 RAB37Q96AX2 223 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 MUCL1Q96DR8 90 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 ZC2HC1AQ96GY0 325 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 HYLS1Q96M11 299 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 CYSTM1Q9H1C7 97 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 KLK9Q9UKQ9 250 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 SNURFQ9Y675 71 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 CR1P17927 2039 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 RTL9Q8NET4 1388 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 FREM1Q5H8C1 2179 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 BAZ2BQ9UIF8 2168 aaKnown RBP1.55□□□□□ -2.16
SNRPF-202ENST00000549580 TRPM1Q7Z4N2 1603 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 COL4A1P02462 1669 aa1.55□□□□□ -2.16
SNRPF-202ENST00000549580 IGKV2D-26A0A0A0MRZ7 120 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 TRAV10A0A0B4J240 114 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 LOC105371267A0A1B0GV96 52 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 B4DSR2 109 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 J3KT08 172 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 IGLV1-51P01701 117 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 MRPS36P82909 103 aaKnown RBP1.54□□□□□ -2.16
SNRPF-202ENST00000549580 Q8N814 137 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 C15orf53Q8NAA6 179 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 OR4B1Q8NGF8 309 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 NUP210Q8TEM1 1887 aaPredicted RBP1.54□□□□□ -2.16
SNRPF-202ENST00000549580 OTOGLQ3ZCN5 2332 aa1.54□□□□□ -2.16
SNRPF-202ENST00000549580 A0A087WSZ3 146 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 TRAV27A0A087WT01 109 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 IGKV3D-7A0A0C4DH55 119 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 IGKV3OR2-268A0A0C4DH90 116 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 hDV103S1A0JD37 113 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 CCDC160A6NGH7 325 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 KDM6AO15550 1401 aaPredicted RBP1.53□□□□□ -2.16
SNRPF-202ENST00000549580 ERC2-IT1O76042 136 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 TNS3Q68CZ2 1445 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 TEX261Q6UWH6 196 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 UNQ6190/PRO20217Q6UXQ8 127 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 MED12LQ86YW9 2145 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 TMEM229BQ8NBD8 167 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 OR5H6Q8NGV6 325 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 ZNF431Q8TF32 576 aaPredicted RBP1.53□□□□□ -2.16
SNRPF-202ENST00000549580 HEATR5BQ9P2D3 2071 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 CHCHD2Q9Y6H1 151 aaPredicted RBP1.53□□□□□ -2.16
SNRPF-202ENST00000549580 U3KQ87 197 aa1.53□□□□□ -2.16
SNRPF-202ENST00000549580 NISCHQ9Y2I1 1504 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 TRAV13-1A0A0B4J241 112 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 TRBV7-6A0A0J9YX20 115 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 ZNF736B4DX44 427 aaPredicted RBP1.52□□□□□ -2.17
SNRPF-202ENST00000549580 H3BMG7 143 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 DEGS1O15121 323 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 CD2P06729 351 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 ZNF93P35789 620 aaPredicted RBP1.52□□□□□ -2.17
SNRPF-202ENST00000549580 SRP9P49458 86 aaKnown RBP1.52□□□□□ -2.17
SNRPF-202ENST00000549580 CNBPP62633 177 aaKnown RBP1.52□□□□□ -2.17
SNRPF-202ENST00000549580 VMA21Q3ZAQ7 101 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 DEFB119Q8N690 84 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 PRELID3AQ96N28 172 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 TPRKBQ9Y3C4 175 aa1.52□□□□□ -2.17
SNRPF-202ENST00000549580 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 A2MP01023 1474 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 TRAV36DV7A0A075B6V5 113 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 A0A087WX48 190 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 TRBV27A0A0K0K1C4 114 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 LOC107984640A0A0U1RRK4 108 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 A0A1B0GX51 115 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 C5orf58C9J3I9 102 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 PRB1P04280 392 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 GTF2A1P52655 376 aaPredicted RBP1.51□□□□□ -2.17
SNRPF-202ENST00000549580 PSG9Q00887 426 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
SNRPF-202ENST00000549580 OR8B8Q15620 311 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 FAM74A1Q5RGS3 127 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 ARPINQ7Z6K5 226 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 OR8I2Q8N0Y5 310 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 TEX29Q8N6K0 151 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 DIRC1Q969H9 104 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 GGACTQ9BVM4 153 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 JPT1Q9UK76 154 aa1.51□□□□□ -2.17
SNRPF-202ENST00000549580 FHAD1B1AJZ9 1412 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 ANKRD31Q8N7Z5 1873 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 ALPK2Q86TB3 2170 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 IGKV2-40A0A087WW87 121 aaPredicted RBP1.5□□□□□ -2.17
SNRPF-202ENST00000549580 BORCS7-ASMTA0A0B4J1R7 106 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms