RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 H7C1C5 153 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 ATP5HO75947 161 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 ATG12O94817 140 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 PPYP01298 95 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 PHBP35232 272 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 TMBIM6P55061 237 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 FOXA3P55318 350 aaPredicted RBP0.24□□□□□ -2.37
CCDC38-204ENST00000546816 LCN6P62502 163 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 KLRD1Q13241 179 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 SPATA45Q537H7 98 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 SPINK9Q5DT21 86 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 AKR1C8PQ5T2L2 129 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 HACD4Q5VWC8 232 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 GPX7Q96SL4 187 aaPredicted RBP0.24□□□□□ -2.37
CCDC38-204ENST00000546816 PAIP2Q9BPZ3 127 aaKnown RBP0.24□□□□□ -2.37
CCDC38-204ENST00000546816 WFDC10AQ9H1F0 79 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 CITO14578 2027 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 SIP14410 1827 aa0.24□□□□□ -2.37
CCDC38-204ENST00000546816 UNC13CQ8NB66 2214 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 HEATR1Q9H583 2144 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 MYO18AQ92614 2054 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 UHRF1BP1Q6BDS2 1440 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 hDV103S1A0JD37 113 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 RIIAD1A6NNX1 92 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 IFNA14P01570 189 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 OGNP20774 298 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 VBP1P61758 197 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 MRPS15P82914 257 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 EIF3IQ13347 325 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 PHF5AQ7RTV0 110 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 ATOH7Q8N100 152 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 LRRC18Q8N456 261 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 OR10AC1Q8NH08 325 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 CEP19Q96LK0 163 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 ZNF714Q96N38 554 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 SMR3AQ99954 134 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 HSPB8Q9UJY1 196 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 SSR3Q9UNL2 185 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 ASCC3Q8N3C0 2202 aaKnown RBP0.23□□□□□ -2.37
CCDC38-204ENST00000546816 COL24A1Q17RW2 1714 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 TET1Q8NFU7 2136 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 FRMPD1Q5SYB0 1578 aa0.23□□□□□ -2.37
CCDC38-204ENST00000546816 NCAPD3P42695 1498 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 MGAMO43451 1857 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 BCL9O00512 1426 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 ERBINQ96RT1 1412 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 ZNF462Q96JM2 2506 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 ODAMA1E959 279 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 C9orf170A2RU37 121 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 C5orf67F2Z3F1 127 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 K7ERJ3 54 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 RER1O15258 196 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 HIST1H2BKO60814 126 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 IFNA4P05014 189 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 HIST1H2BJP06899 126 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 MSMO1Q15800 293 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 C1orf140Q5VVS0 124 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 NUP35Q8NFH5 326 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 GINS3Q9BRX5 216 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 SS18L2Q9UHA2 77 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 DOCK4Q8N1I0 1966 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
CCDC38-204ENST00000546816 FREM3P0C091 2139 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 UBR2Q8IWV8 1755 aa0.22□□□□□ -2.37
CCDC38-204ENST00000546816 CD109Q6YHK3 1445 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 IFNA1P01562 189 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 IGHV3-33P01772 117 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 APOA2P02652 100 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 CD14P08571 375 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 IDO1P14902 403 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 IFT20Q8IY31 132 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 MALSU1Q96EH3 234 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 MAP1LC3BQ9GZQ8 125 aa0.21□□□□□ -2.38
CCDC38-204ENST00000546816 TCEAL2Q9H3H9 227 aaPredicted RBP0.21□□□□□ -2.38
CCDC38-204ENST00000546816 EIF3AQ14152 1382 aaKnown RBP0.2□□□□□ -2.38
CCDC38-204ENST00000546816 MYO5AQ9Y4I1 1855 aaKnown RBP0.2□□□□□ -2.38
CCDC38-204ENST00000546816 APCP25054 2843 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 TRAV23DV6A0A075B6W5 121 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 TRBV30A0A0K0K1B3 111 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 MFSD11O43934 449 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 CSN2P05814 226 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 FXYD4P59646 89 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 HBBP68871 147 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 RPL19P84098 196 aaKnown RBP0.2□□□□□ -2.38
CCDC38-204ENST00000546816 MIR22HGQ0VDD5 57 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 SNCBQ16143 134 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 FOXI2Q6ZQN5 318 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 OR13C6PQ8NH95 151 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 PBDC1Q9BVG4 233 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 RTL8AQ9BWD3 113 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 NIT2Q9NQR4 276 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 PLAC8Q9NZF1 115 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 RNF11Q9Y3C5 154 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 CAMSAP2Q08AD1 1489 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 PTPRFP10586 1907 aa0.2□□□□□ -2.38
CCDC38-204ENST00000546816 MYLKQ15746 1914 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms