RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 FOXL1Q12952 345 aa13.33□□□□□ -0.28
TMEM50B-210ENST00000542230 IL17RELQ6ZVW7 336 aa13.33□□□□□ -0.28
TMEM50B-210ENST00000542230 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
TMEM50B-210ENST00000542230 KLF12Q9Y4X4 402 aa13.33□□□□□ -0.28
TMEM50B-210ENST00000542230 J3QLI3 93 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 IGLV2-11P01706 119 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 UBE2G1P62253 170 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 GFI1BQ5VTD9 330 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 DUX5Q96PT3 197 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 SERTAD4Q9NUC0 356 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 FSHBP01225 129 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 IBA57Q5T440 356 aaKnown RBP13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 KCNIP4Q6PIL6 250 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 IL36BQ9NZH7 164 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 PITPNC1Q9UKF7 332 aa13.32□□□□□ -0.28
TMEM50B-210ENST00000542230 SMAD7O15105 426 aaKnown RBP13.31□□□□□ -0.28
TMEM50B-210ENST00000542230 PF4V1P10720 104 aa13.31□□□□□ -0.28
TMEM50B-210ENST00000542230 TRBV7-1A0A0A6YYK4 115 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 AP4M1O00189 453 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 BMPR1BO00238 502 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 UNQ9165/PRO28630Q6UXU0 137 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 NUDT10Q8NFP7 164 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 CMTM2Q8TAZ6 248 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 MLST8Q9BVC4 326 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
TMEM50B-210ENST00000542230 M0QZK8 103 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 PRNTQ86SH4 94 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 GPR82Q96P67 336 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 IMMP2LQ96T52 175 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 SELENOKQ9Y6D0 94 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 IFITM10A6NMD0 228 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 ZNF785A8K8V0 405 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 ZNF705GA8MUZ8 300 aaPredicted RBP13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 UBE2CO00762 179 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 BUB3O43684 328 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 LTAP01374 205 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 TYMSP04818 313 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
TMEM50B-210ENST00000542230 ZNF705FA8MVS1 300 aaPredicted RBP13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 IGHG4P01861 327 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 RPEL1Q2QD12 228 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 ANK3Q12955 4377 aaKnown RBP13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 FAM223BA6NKX1 122 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 HOXA3O43365 443 aaPredicted RBP13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 CBLN1P23435 193 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 CFHR3Q02985 330 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 Q86TA4 180 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 FAM223AQ8IWN6 122 aa13.28□□□□□ -0.28
TMEM50B-210ENST00000542230 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 ARL3P36405 182 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 FMC1Q96HJ9 113 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 DIRC3C9JPN6 131 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 SCGB2A1O75556 95 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 CYB5R2Q6BCY4 276 aa13.27□□□□□ -0.29
TMEM50B-210ENST00000542230 RAB9AP51151 201 aa13.26□□□□□ -0.29
TMEM50B-210ENST00000542230 Q6YL49 198 aa13.26□□□□□ -0.29
TMEM50B-210ENST00000542230 RNF182Q8N6D2 247 aa13.26□□□□□ -0.29
TMEM50B-210ENST00000542230 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 PRSS57Q6UWY2 283 aa13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 A0A1B0GUS0 222 aa13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 OR4X2Q8NGF9 303 aa13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 TRAPPC1Q9Y5R8 145 aa13.25□□□□□ -0.29
TMEM50B-210ENST00000542230 HOXA5P20719 270 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 VPREB3Q9UKI3 123 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 SMIM27A0A1W2PRY6 76 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 GATCO43716 136 aaKnown RBP13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 EDN2P20800 178 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 LYPD1Q8N2G4 141 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 ZC2HC1AQ96GY0 325 aa13.24□□□□□ -0.29
TMEM50B-210ENST00000542230 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 PDE6HQ13956 83 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 S100A7AQ86SG5 101 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 BTF3L4Q96K17 158 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 GPR61Q9BZJ8 451 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 PSG8Q9UQ74 426 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 RELQ04864 619 aaPredicted RBP13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 C9orf139Q6ZV77 190 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 FAM231DQ6ZW35 169 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 METTL26Q96S19 204 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
TMEM50B-210ENST00000542230 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 GZMBP10144 247 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 PSG3Q16557 428 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 TMEM183AQ8IXX5 376 aa13.22□□□□□ -0.29
TMEM50B-210ENST00000542230 LINC00518Q8N0U6 118 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms