RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 GNG2P59768 71 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 CCSMST1Q4G0I0 132 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 LCN15Q6UWW0 184 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 IZUMO2Q6UXV1 221 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 Q6ZS52 159 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 SCRT1Q9BWW7 348 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 RERGLQ9H628 205 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 BCL2L10Q9HD36 194 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 NIT2Q9NQR4 276 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 COMMD3Q9UBI1 195 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 BOKQ9UMX3 212 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-209ENST00000540819 SLX4Q8IY92 1834 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 CITO14578 2027 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 KIAA1107Q9UPP5 1409 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 A0A0G2JMM0 328 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 A0A1W2PPB8 328 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 KIR3DP1A8MWS1 328 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 TIMM17BO60830 172 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 TPT1P13693 172 aaKnown RBP3.26□□□□□ -1.89
PRKDC-209ENST00000540819 BTG2P78543 158 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 MEIG1Q5JSS6 88 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 C8orf59Q8N0T1 100 aaPredicted RBP3.26□□□□□ -1.89
PRKDC-209ENST00000540819 LINC00311Q8N616 119 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 ACBD7Q8N6N7 88 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 NAA38Q9BRA0 125 aaKnown RBP3.26□□□□□ -1.89
PRKDC-209ENST00000540819 HHLA3Q9XRX5 114 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 MPC1Q9Y5U8 109 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
PRKDC-209ENST00000540819 FRMPD1Q5SYB0 1578 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 PVALEFA0A1B0GWK0 134 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 IFITM5A6NNB3 132 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 CPSF4O95639 269 aaKnown RBP3.25□□□□□ -1.89
PRKDC-209ENST00000540819 IFNA17P01571 189 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 CLPSP04118 112 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 CDK5R1Q15078 307 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 SLC35E3Q7Z769 313 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 ATOH7Q8N100 152 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 SNRNP25Q9BV90 132 aaKnown RBP3.25□□□□□ -1.89
PRKDC-209ENST00000540819 DUSP21Q9H596 190 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 MINOS1-NBL1R4GNA1 71 aa3.25□□□□□ -1.89
PRKDC-209ENST00000540819 IGHV1-18A0A0C4DH31 117 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 PSCAO43653 123 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 PYYP10082 97 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 CRYGAP11844 174 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 ZNF93P35789 620 aaPredicted RBP3.24□□□□□ -1.89
PRKDC-209ENST00000540819 SNRPD3P62318 126 aaKnown RBP3.24□□□□□ -1.89
PRKDC-209ENST00000540819 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
PRKDC-209ENST00000540819 PKMYT1Q99640 499 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 DNAJC15Q9Y5T4 150 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 RGS12O14924 1447 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 MYH1P12882 1939 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 SHANK3Q9BYB0 1731 aa3.24□□□□□ -1.89
PRKDC-209ENST00000540819 COL1A1P02452 1464 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-209ENST00000540819 IGLV3-16A0A075B6K0 115 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 TRAV40A0A0B4J280 105 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 SPAARA0A1B0GVQ0 90 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 ZNF609O15014 1411 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 LYRM1O43325 122 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 DEFA4P12838 97 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 FABP4P15090 132 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 HIST1H1DP16402 221 aaKnown RBP3.23□□□□□ -1.89
PRKDC-209ENST00000540819 SPINK14Q6IE38 97 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 AAED1Q7RTV5 226 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 CCL4L1Q8NHW4 92 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 RB1CC1Q8TDY2 1594 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 CIB3Q96Q77 187 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-209ENST00000540819 SLC35B3Q9H1N7 401 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 KIF13AQ9H1H9 1805 aa3.23□□□□□ -1.89
PRKDC-209ENST00000540819 CROCCQ5TZA2 2017 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 CCDC88CQ9P219 2028 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 TRBV20-1A0A075B6N2 111 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 IGHV3-64A0A075B6Q5 118 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 OR1I1O60431 355 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 YPEL1O60688 119 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 SNAPC5O75971 98 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 SAA1P0DJI8 122 aaPredicted RBP3.22□□□□□ -1.89
PRKDC-209ENST00000540819 CCL4P13236 92 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 TMEM258P61165 79 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 Q6ZQT0 140 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 TMEM136Q6ZRR5 245 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 SH2D6Q7Z4S9 175 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 RETNLBQ9BQ08 111 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 HIGD2AQ9BW72 106 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 SPANXDQ9BXN6 97 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 SAR1AQ9NR31 198 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 METTL1Q9UBP6 276 aaKnown RBP3.22□□□□□ -1.89
PRKDC-209ENST00000540819 MYOM2P54296 1465 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 PRDM2Q13029 1718 aa3.22□□□□□ -1.89
PRKDC-209ENST00000540819 CUL7Q14999 1698 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 TRAV30A0A087WSZ9 112 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 LOC107986453A0A1B0GWG9 222 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 OR51F1A6NGY5 319 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 M0R143 59 aa3.21□□□□□ -1.9
PRKDC-209ENST00000540819 SYNGR2O43760 224 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms