RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PSG8Q9UQ74 426 aa19.49■□□□□ 0.71
RAB40C-204ENST00000538492 ZNF705AQ6ZN79 300 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-204ENST00000538492 IGHV3OR16-8A0A075B7F1 116 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 K7EQM0 130 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 PSG3Q16557 428 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 LYPD1Q8N2G4 141 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 ITLN2Q8WWU7 325 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-204ENST00000538492 ZNF48Q96MX3 618 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-204ENST00000538492 IGHV3-35A0A0C4DH35 117 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 FAM106CPP0CH98 169 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 BORCS7Q96B45 105 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 SNHG12Q9BXW3 62 aa19.48■□□□□ 0.71
RAB40C-204ENST00000538492 C20orf144Q9BQM9 153 aa19.47■□□□□ 0.71
RAB40C-204ENST00000538492 LPAR2Q9HBW0 351 aa19.47■□□□□ 0.71
RAB40C-204ENST00000538492 SPTAN1Q13813 2472 aaKnown RBP19.47■□□□□ 0.71
RAB40C-204ENST00000538492 LBHQ53QV2 105 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-204ENST00000538492 TMUB1Q9BVT8 246 aa19.47■□□□□ 0.71
RAB40C-204ENST00000538492 SOX21Q9Y651 276 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-204ENST00000538492 COL12A1Q99715 3063 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 SAA4P35542 130 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 AJUBAQ96IF1 538 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 M0QZ24 198 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 CTSGP08311 255 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 UBE2E1P51965 193 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 AAMDCQ9H7C9 122 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 ZFP30Q9Y2G7 519 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 CELSR1Q9NYQ6 3014 aa19.46■□□□□ 0.71
RAB40C-204ENST00000538492 TRBV6-1A0A0K0K1D8 114 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 M0R2Z0 102 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 RNF224P0DH78 156 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 GNLYP22749 145 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 ECSCRQ19T08 205 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 OR4B1Q8NGF8 309 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 LMO4P61968 165 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 S100A7AQ86SG5 101 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 C8orf49Q96NF6 230 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 PRORYQ9H606 182 aa19.45■□□□□ 0.7
RAB40C-204ENST00000538492 FAM231BA6NCW3 169 aa19.44■□□□□ 0.7
RAB40C-204ENST00000538492 CHEK1O14757 476 aa19.44■□□□□ 0.7
RAB40C-204ENST00000538492 CRIP1P50238 77 aa19.44■□□□□ 0.7
RAB40C-204ENST00000538492 URB1-AS1Q96HZ7 61 aa19.44■□□□□ 0.7
RAB40C-204ENST00000538492 C1RLQ9NZP8 487 aa19.44■□□□□ 0.7
RAB40C-204ENST00000538492 SH2D7A6NKC9 451 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-204ENST00000538492 C16orf54Q6UWD8 224 aa19.43■□□□□ 0.7
RAB40C-204ENST00000538492 MIEN1Q9BRT3 115 aa19.43■□□□□ 0.7
RAB40C-204ENST00000538492 PDE6HQ13956 83 aa19.43■□□□□ 0.7
RAB40C-204ENST00000538492 APOHP02749 345 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-204ENST00000538492 PMCHL1Q16048 86 aa19.42■□□□□ 0.7
RAB40C-204ENST00000538492 LCN12Q6JVE5 192 aa19.42■□□□□ 0.7
RAB40C-204ENST00000538492 UNQ5815/PRO19632Q6UWF5 114 aa19.42■□□□□ 0.7
RAB40C-204ENST00000538492 FAM181BA6NEQ2 426 aa19.42■□□□□ 0.7
RAB40C-204ENST00000538492 ATOH7Q8N100 152 aa19.42■□□□□ 0.7
RAB40C-204ENST00000538492 M0R143 59 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 SFTPCP11686 197 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 TPPP3Q9BW30 176 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 OVOL3O00110 214 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 ATP6V0E1O15342 81 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 ARMS2P0C7Q2 107 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 C15orf32Q32M92 178 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 IGFL4Q6B9Z1 124 aa19.41■□□□□ 0.7
RAB40C-204ENST00000538492 HAX1O00165 279 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 GPR183P32249 361 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 EBLN2Q6P2I7 272 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 PIP4P2Q8N4L2 257 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 RABAC1Q9UI14 185 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 IGKV2-40A0A087WW87 121 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-204ENST00000538492 LOC102724200A0A096LPH7 203 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-204ENST00000538492 IGKV2D-40P01614 121 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-204ENST00000538492 RPL7P18124 248 aaKnown RBP19.4■□□□□ 0.7
RAB40C-204ENST00000538492 RAB4AP20338 218 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 CSN1S1P47710 185 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 SPATA45Q537H7 98 aa19.4■□□□□ 0.7
RAB40C-204ENST00000538492 LINC01548A6NM66 108 aa19.39■□□□□ 0.7
RAB40C-204ENST00000538492 A0A1B0GUT8 65 aa19.39■□□□□ 0.69
RAB40C-204ENST00000538492 CT45A10P0DMU9 189 aa19.39■□□□□ 0.69
RAB40C-204ENST00000538492 TMEM190Q8WZ59 177 aa19.39■□□□□ 0.69
RAB40C-204ENST00000538492 G3V318 75 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 SCGB2A1O75556 95 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 PSG9Q00887 426 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 CLEC5AQ9NY25 188 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 SMAD5-AS1Q9Y6J3 95 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 SSTP61278 116 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 RHOGP84095 191 aa19.38■□□□□ 0.69
RAB40C-204ENST00000538492 FAM110DQ8TAY7 271 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-204ENST00000538492 TMSB15BA0A087X1C1 80 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 CTRLP40313 264 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 PKD1L2Q7Z442 2459 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 IGHV3OR16-10A0A075B7F0 116 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.37■□□□□ 0.69
RAB40C-204ENST00000538492 NPFFO15130 113 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 CLEC3BP05452 202 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 HLA-DMBP28068 263 aa19.37■□□□□ 0.69
RAB40C-204ENST00000538492 ZNF138P52744 262 aa19.36■□□□□ 0.69
RAB40C-204ENST00000538492 MAJINQ3KP22 176 aa19.36■□□□□ 0.69
RAB40C-204ENST00000538492 ZNF502Q8TBZ5 544 aa19.36■□□□□ 0.69
RAB40C-204ENST00000538492 TXN2Q99757 166 aa19.36■□□□□ 0.69
RAB40C-204ENST00000538492 MAP1AP78559 2803 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-204ENST00000538492 IGHV4-39P01824 125 aa19.35■□□□□ 0.69
RAB40C-204ENST00000538492 NDFIP1Q9BT67 221 aa19.35■□□□□ 0.69
RAB40C-204ENST00000538492 ABCA2Q9BZC7 2435 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms