RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SAMD13Q5VXD3 122 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 AHSA2Q719I0 299 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 OR1B1Q8NGR6 318 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 RAB2BQ8WUD1 216 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 TMEM170AQ8WVE7 144 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 RRNAD1Q96FB5 475 aaKnown RBP5.89□□□□□ -1.47
CPSF7-217ENST00000537162 TMEM80Q96HE8 168 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 TXNDC17Q9BRA2 123 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 SLC25A22Q9H936 323 aa5.89□□□□□ -1.47
CPSF7-217ENST00000537162 IGKV1D-37A0A075B6S9 117 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 IGKV1OR2-108A0A075B7D4 117 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 TRAV8-6A0A0B4J262 113 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 CHTF8P0CG12 524 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 SLC25A4P12235 298 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 GALR1P47211 349 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 MLLT11Q13015 90 aaPredicted RBP5.88□□□□□ -1.47
CPSF7-217ENST00000537162 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 BEST4Q8NFU0 473 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 ATG5Q9H1Y0 275 aa5.88□□□□□ -1.47
CPSF7-217ENST00000537162 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
CPSF7-217ENST00000537162 IGKV2D-24A0A075B6R9 120 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 LINC00854A0A1B0GVQ3 168 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 PTGES3LE9PB15 166 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 H7C1H1 209 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 MYL12BO14950 172 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 NOL3O60936 208 aaKnown RBP5.87□□□□□ -1.47
CPSF7-217ENST00000537162 PITX3O75364 302 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 GABARAPO95166 117 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 IGKV1-5P01602 117 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 ORM1P02763 201 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 TCL1AP56279 114 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 RPS25P62851 125 aaKnown RBP5.87□□□□□ -1.47
CPSF7-217ENST00000537162 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
CPSF7-217ENST00000537162 SPHARQ15513 63 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 TMEM91Q6ZNR0 172 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 LINC00299Q6ZSB3 139 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 CCDC190Q86UF4 302 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 NANOGP1Q8N7R0 232 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 RSL24D1Q9UHA3 163 aaKnown RBP5.87□□□□□ -1.47
CPSF7-217ENST00000537162 TP53TG3Q9ULZ0 132 aa5.87□□□□□ -1.47
CPSF7-217ENST00000537162 CXCL3P19876 107 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 HRH1P35367 487 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 HTR2BP41595 481 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-217ENST00000537162 TRAM1Q15629 374 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 IQCF2Q8IXL9 164 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 NHLRC2Q8NBF2 726 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 PYGO2Q9BRQ0 406 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 CCDC90BQ9GZT6 254 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 NDUFB11Q9NX14 153 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 V9GY05 133 aa5.86□□□□□ -1.47
CPSF7-217ENST00000537162 PRAC2D3DTV9 90 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 TMEM127O75204 238 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 GNG2P59768 71 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 NEDD8Q15843 81 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 PHLDA2Q53GA4 152 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 TEPPQ6URK8 271 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 ZNF680Q8NEM1 530 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 ZNF431Q8TF32 576 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-217ENST00000537162 YIPF6Q96EC8 236 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 ZC2HC1AQ96GY0 325 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 MGLLQ99685 303 aa5.85□□□□□ -1.47
CPSF7-217ENST00000537162 TRAV8-1A0A0A6YYK1 113 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 METTL21EPA6NDL7 271 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 PRSS1P07477 247 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 CBX5P45973 191 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 HERV-K104P61576 105 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 C2orf83Q53S99 150 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 IDNKQ5T6J7 187 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 C7orf33Q8WU49 177 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 RPUSD4Q96CM3 377 aaKnown RBP5.84□□□□□ -1.47
CPSF7-217ENST00000537162 FUNDC2Q9BWH2 189 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 FXYD6Q9H0Q3 95 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 COX11Q9Y6N1 276 aa5.84□□□□□ -1.47
CPSF7-217ENST00000537162 ATG12O94817 140 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 CT45A10P0DMU9 189 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 CTF1Q16619 201 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 GPR107Q5VW38 600 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 Q6ZQT7 251 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 HOGA1Q86XE5 327 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 RNASEH2CQ8TDP1 164 aaKnown RBP5.83□□□□□ -1.48
CPSF7-217ENST00000537162 GTSF1Q8WW33 167 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 UFD1Q92890 307 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 ENY2Q9NPA8 101 aa5.83□□□□□ -1.48
CPSF7-217ENST00000537162 TRAV26-2A0A0B4J265 109 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 MUC21A0A0G2JKD1 596 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 A0A0G2JRQ6 117 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 ZFP92A6NM28 416 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 NOTOA8MTQ0 251 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 H3BMQ9 156 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 GPR31O00270 319 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 CCSO14618 274 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 TAS2R20P59543 309 aa5.82□□□□□ -1.48
CPSF7-217ENST00000537162 ARL6IP1Q15041 203 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms